CODE At5g66420 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G66420.1 CDS gene_syn K1F13.7, K1F13_7 go_component cellular_component|GO:0005575||ND product unknown protein note LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 809 Blast hits to 807 proteins in 200 species: Archae - 4; Bacteria - 603; Metazoa - 0; Fungi - 61; Plants - 24; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). protein_id AT5G66420.1p transcript_id AT5G66420.1 protein_id AT5G66420.1p transcript_id AT5G66420.1 COOR C/26521893-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524537 HITS RAFL15-31-P11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 300-UTR3 COOR W/26521170-26521267,26521348-26521696 HITS GABI_090H11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 7e-25 LOCN 300-UTR3 COOR W/26521665-26521721 HITS RAFL09-16-E15 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-143 LOCN Exon COOR C/26521685-26521779,26521790-26522049,26522124-26522194 HITS RAFL04-09-O19 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-124 LOCN Exon COOR C/26521689-26521779,26521790-26522049,26522124-26522375 HITS R12552 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.81 LOCN Exon COOR C/26521690-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26525029 NOTE AF378889 HITS RAFL21-87-F04 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.30 LOCN Exon COOR C/26521692-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524708,26524861-26525061 HITS GABI_209F03 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 2e-07 LOCN 300-UTR3 COOR C/26521796-26521822 HITS U12552 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/26521893-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524537 NOTE BT001069 HITS G12552 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR C/26521893-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524537 NOTE U12552 BT001069 pENTR_Sfi HITS SAIL_634_H02 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 1e-38 LOCN Exon COOR W/26522177-26522298 HITS GABI_645F04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN Exon COOR C/26522183-26522619 HITS GABI_040B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN Intron COOR C/26522309-26522745 HITS GABI_040B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN Intron COOR C/26522321-26522750 HITS RAFL22-24-H07 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 5e-97 LOCN Exon COOR W/26522513-26522636,26522761-26522955 HITS GABI_166G05 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL 1e-71 LOCN Intron COOR C/26522584-26522731 NOTE at5g66420 HITS GABI_403G12 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL e-158 LOCN Exon COOR W/26522789-26523073 NOTE at5g66420 HITS RATM11-5287-1_G [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL 0.0 LOCN Exon COOR C/26523541-26524249 HITS SK25832 [Seq] [About SK collection] [Vector pSKI015] TYPE SK FST EVAL 0.0 LOCN Exon COOR C/26523890-26524456 HITS SAIL_236_F12 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 0.0 LOCN 300-UTR5 COOR C/26523907-26524564 HITS RATM11-5287-1_H [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL 0.0 LOCN Exon COOR W/26524242-26524937 HITS SAIL_274_D07 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 2e-06 LOCN 1000-Promotor COOR W/26524844-26524887 HITS SALK_082859.26.60.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 2e-88 LOCN 1000-Promotor COOR C/26524934-26525117 HITS SALK_005225.29.99.f [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 1e-98 LOCN 1000-Promotor COOR C/26525038-26525375 HITS SAIL_1261_A05 SAIL T-DNA Homozygous Knockout Line for At5g66420
[Seq] [SAIL HM Collection by Salk] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL T-DNA HM EVAL 0.0 LOCN 1000-Promotor COOR W/26525084-26525694 NOTE At5g66420 HITS SALK_077054.31.05.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL e-126 LOCN 1000-Promotor COOR W/26525507-26525790 CODE At5g66420 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G66420.2 CDS gene_syn K1F13.7, K1F13_7 go_component cellular_component|GO:0005575||ND product unknown protein note LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 820 Blast hits to 818 proteins in 200 species: Archae - 4; Bacteria - 603; Metazoa - 0; Fungi - 61; Plants - 24; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). protein_id AT5G66420.2p transcript_id AT5G66420.2 protein_id AT5G66420.2p transcript_id AT5G66420.2 COOR C/26521893-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524708,26524861-26524986 HITS RAFL15-31-P11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 300-UTR3 COOR W/26521170-26521267,26521348-26521696 HITS GABI_090H11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 7e-25 LOCN 300-UTR3 COOR W/26521665-26521721 HITS RAFL09-16-E15 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-143 LOCN Exon COOR C/26521685-26521779,26521790-26522049,26522124-26522194 HITS RAFL04-09-O19 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-124 LOCN Exon COOR C/26521689-26521779,26521790-26522049,26522124-26522375 HITS R12552 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.81 LOCN Exon COOR C/26521690-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26525029 NOTE AF378889 HITS RAFL21-87-F04 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.30 LOCN Exon COOR C/26521692-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524708,26524861-26525061 HITS GABI_209F03 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 2e-07 LOCN 300-UTR3 COOR C/26521796-26521822 HITS U12552 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/26521893-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524537 NOTE BT001069 HITS G12552 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR C/26521893-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524537 NOTE U12552 BT001069 pENTR_Sfi HITS SAIL_634_H02 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 1e-38 LOCN Exon COOR W/26522177-26522298 HITS GABI_645F04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN Exon COOR C/26522183-26522619 HITS GABI_040B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN Intron COOR C/26522309-26522745 HITS GABI_040B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN Intron COOR C/26522321-26522750 HITS RAFL22-24-H07 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 5e-97 LOCN Exon COOR W/26522513-26522636,26522761-26522955 HITS GABI_166G05 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL 1e-71 LOCN Intron COOR C/26522584-26522731 NOTE at5g66420 HITS GABI_403G12 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL e-158 LOCN Exon COOR W/26522789-26523073 NOTE at5g66420 HITS RATM11-5287-1_G [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL 0.0 LOCN Exon COOR C/26523541-26524249 HITS SK25832 [Seq] [About SK collection] [Vector pSKI015] TYPE SK FST EVAL 0.0 LOCN Exon COOR C/26523890-26524456 HITS SAIL_236_F12 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 0.0 LOCN Exon COOR C/26523907-26524564 HITS RATM11-5287-1_H [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL 0.0 LOCN Exon COOR W/26524242-26524937 HITS SAIL_274_D07 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 2e-06 LOCN Intron COOR W/26524844-26524887 HITS SALK_082859.26.60.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 2e-88 LOCN 300-UTR5 COOR C/26524934-26525117 HITS SALK_005225.29.99.f [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 1e-98 LOCN 1000-Promotor COOR C/26525038-26525375 HITS SAIL_1261_A05 SAIL T-DNA Homozygous Knockout Line for At5g66420
[Seq] [SAIL HM Collection by Salk] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL T-DNA HM EVAL 0.0 LOCN 300-UTR5 COOR W/26525084-26525694 NOTE At5g66420 HITS SALK_077054.31.05.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL e-126 LOCN 1000-Promotor COOR W/26525507-26525790 HITS SM_3_22023 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 8e-95 LOCN 1000-Promotor COOR W/26525679-26525853 NOTE CS110494 HITS SM_3_22029 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 8e-95 LOCN 1000-Promotor COOR W/26525679-26525853 NOTE CS111155