CODE At5g66410 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G66410.1 CDS gene_syn K1F13.6, K1F13_6, PLP3b, Phosducin-like protein 3 homolog gene PLP3b function Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy. go_component cellular_component|GO:0005575||ND go_process nuclear division|GO:0000280|18390592|IGI go_process cytokinesis|GO:0000910|18390592|IGI go_process nucleolus organization|GO:0007000|18390592|IGI go_process cortical microtubule organization|GO:0043622|18390592|IGI go_process anisotropic cell growth|GO:0051211|18390592|IGI go_function beta-tubulin binding|GO:0048487|18390592|ISS product PLP3b (Phosducin-like protein 3 homolog); beta-tubulin binding note Phosducin-like protein 3 homolog (PLP3b); FUNCTIONS IN: beta-tubulin binding; INVOLVED IN: cortical microtubule organization, nucleolus organization, nuclear division, anisotropic cell growth, cytokinesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PLP3a (Phosducin-like protein 3 homolog); beta-tubulin binding (TAIR:AT3G50960.1); Has 702 Blast hits to 698 proteins in 164 species: Archae - 6; Bacteria - 33; Metazoa - 338; Fungi - 105; Plants - 84; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). protein_id AT5G66410.1p transcript_id AT5G66410.1 protein_id AT5G66410.1p transcript_id AT5G66410.1 COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521459 HITS U21835 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN 1000-Promotor COOR C/26518511-26518720,26518803-26519153 NOTE BT002226 HITS RAFL05-03-I09 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 1000-Promotor COOR W/26518547-26518719,26518802-26519194,26519202-26519235 HITS SAIL_625_D11 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 8e-18 LOCN 1000-Promotor COOR C/26519342-26519392 HITS SM_3_34464 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 4e-23 LOCN 1000-Promotor COOR W/26519380-26519433 NOTE CS121175 HITS SAIL_244_F10 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 1e-35 LOCN 1000-Promotor COOR W/26519394-26519470 HITS SK25469 [Seq] [About SK collection] [Vector pSKI015] TYPE SK FST EVAL 1e-30 LOCN 1000-Promotor COOR W/26519401-26519468,26519401-26519468 HITS CSHL_GT9152 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN Exon COOR C/26519416-26519969 HITS GABI_316B06 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 5e-80 LOCN 1000-Promotor COOR W/26519541-26519710 HITS GABI_349F04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL e-117 LOCN 300-UTR5 COOR W/26519747-26519978 HITS RAFL15-31-P11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.34 LOCN Exon COOR W/26519774-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521697 HITS R50024 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 98.34 LOCN Exon COOR W/26519774-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521697 NOTE BT003998 HITS GT_5_14950 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 1e-16 LOCN 300-UTR5 COOR C/26519789-26519848 NOTE CS175449 HITS AY086393 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR W/26519806-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521637 HITS U50024 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521490 NOTE BT005683 HITS G50024 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521490 NOTE U50024 BT005683 pENTR_Sfi HITS CSHL_GT9152 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN Exon COOR W/26519988-26520436 HITS RAFL15-31-P11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR W/26521170-26521267,26521348-26521696 HITS GABI_090H11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 7e-25 LOCN 300-UTR3 COOR W/26521665-26521721 HITS RAFL09-16-E15 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-143 LOCN 300-UTR3 COOR C/26521685-26521779,26521790-26522049,26522124-26522194 HITS RAFL04-09-O19 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-124 LOCN 300-UTR3 COOR C/26521689-26521779,26521790-26522049,26522124-26522375 HITS R12552 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.81 LOCN 300-UTR3 COOR C/26521690-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26525029 NOTE AF378889 HITS RAFL21-87-F04 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.30 LOCN 300-UTR3 COOR C/26521692-26522047,26522122-26522375,26522460-26522638,26522763-26523010,26523129-26523342,26523419-26523634,26523717-26523923,26524043-26524708,26524861-26525061