CODE At5g66400 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G66400.2 CDS gene_syn ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, ATDI8, K1F13.5, K1F13_5, RAB18, RESPONSIVE TO ABA 18 gene RAB18 function Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells. go_component cellular_component|GO:0005575||ND go_process response to stress|GO:0006950|7948863|IEP go_process response to water deprivation|GO:0009414|7823904|IEP go_process cold acclimation|GO:0009631|15356392|IGI go_process response to abscisic acid stimulus|GO:0009737|1463831|IEP go_process response to 1-Aminocyclopropane-1-carboxylic Acid|GO:0009961|16024687|IEP go_function molecular_function|GO:0003674||ND product RAB18 (RESPONSIVE TO ABA 18) note RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to water deprivation, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); Has 50699 Blast hits to 19024 proteins in 1300 species: Archae - 44; Bacteria - 15736; Metazoa - 16335; Fungi - 3034; Plants - 6644; Viruses - 531; Other Eukaryotes - 8375 (source: NCBI BLink). protein_id AT5G66400.2p transcript_id AT5G66400.2 protein_id AT5G66400.2p transcript_id AT5G66400.2 COOR C/26518511-26518717,26518803-26519153 HITS L04173 [GenBank] TYPE Community DNA EVAL 99.46 LOCN Exon COOR C/26518236-26519835,26519839-26519914 HITS SM_3_24889 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 300-UTR3 COOR W/26518278-26518735 NOTE CS112845 HITS RAFL09-72-M06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26518300-26518687 HITS RAFL09-86-L23 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26518300-26518705 HITS R14927 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN Exon COOR C/26518300-26518720,26518803-26519242 NOTE AF428458 HITS RAFL05-18-M18 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26518333-26518721,26518804-26518992 HITS R21835 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN Exon COOR C/26518356-26518720,26518803-26519235 NOTE AY093779 HITS GABI_010E04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 1e-07 LOCN 300-UTR3 COOR W/26518465-26518499 HITS SM_3_32234 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 9e-59 LOCN Exon COOR C/26518467-26518584 NOTE CS118945 HITS SM_3_15964 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL e-158 LOCN 300-UTR3 COOR W/26518489-26518770 NOTE CS103951 HITS SM_3_35973 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 300-UTR3 COOR W/26518489-26518954 NOTE CS122684 HITS U21835 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/26518511-26518720,26518803-26519153 NOTE BT002226 HITS RAFL05-03-I09 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR W/26518547-26518719,26518802-26519194,26519202-26519235 HITS SAIL_625_D11 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 8e-18 LOCN 300-UTR5 COOR C/26519342-26519392 HITS SM_3_34464 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 4e-23 LOCN 300-UTR5 COOR W/26519380-26519433 NOTE CS121175 HITS SAIL_244_F10 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 1e-35 LOCN 300-UTR5 COOR W/26519394-26519470 HITS SK25469 [Seq] [About SK collection] [Vector pSKI015] TYPE SK FST EVAL 1e-30 LOCN 300-UTR5 COOR W/26519401-26519468,26519401-26519468 HITS CSHL_GT9152 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN 1000-Promotor COOR C/26519416-26519969 HITS GABI_316B06 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 5e-80 LOCN 1000-Promotor COOR W/26519541-26519710 HITS GABI_349F04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL e-117 LOCN 1000-Promotor COOR W/26519747-26519978 HITS RAFL15-31-P11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.34 LOCN 1000-Promotor COOR W/26519774-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521697 HITS R50024 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 98.34 LOCN 1000-Promotor COOR W/26519774-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521697 NOTE BT003998 HITS GT_5_14950 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 1e-16 LOCN 1000-Promotor COOR C/26519789-26519848 NOTE CS175449 HITS AY086393 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN 1000-Promotor COOR W/26519806-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521637 HITS U50024 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN 1000-Promotor COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521490 NOTE BT005683 HITS G50024 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN 1000-Promotor COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521490 NOTE U50024 BT005683 pENTR_Sfi HITS CSHL_GT9152 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN 1000-Promotor COOR W/26519988-26520436 CODE At5g66400 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G66400.1 CDS gene_syn ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, ATDI8, K1F13.5, K1F13_5, RAB18, RESPONSIVE TO ABA 18 gene RAB18 function Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells. go_component cellular_component|GO:0005575||ND go_process response to stress|GO:0006950|7948863|IEP go_process response to water deprivation|GO:0009414|7823904|IEP go_process cold acclimation|GO:0009631|15356392|IGI go_process response to abscisic acid stimulus|GO:0009737|1463831|IEP go_process response to 1-Aminocyclopropane-1-carboxylic Acid|GO:0009961|16024687|IEP go_function molecular_function|GO:0003674||ND product RAB18 (RESPONSIVE TO ABA 18) note RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to water deprivation, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); Has 49883 Blast hits to 18155 proteins in 1224 species: Archae - 38; Bacteria - 15309; Metazoa - 16363; Fungi - 3076; Plants - 6521; Viruses - 510; Other Eukaryotes - 8066 (source: NCBI BLink). protein_id AT5G66400.1p transcript_id AT5G66400.1 protein_id AT5G66400.1p transcript_id AT5G66400.1 COOR C/26518511-26518720,26518803-26519153 HITS L04173 [GenBank] TYPE Community DNA EVAL 99.46 LOCN Exon COOR C/26518236-26519835,26519839-26519914 HITS SM_3_24889 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 300-UTR3 COOR W/26518278-26518735 NOTE CS112845 HITS RAFL09-72-M06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26518300-26518687 HITS RAFL09-86-L23 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26518300-26518705 HITS R14927 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN Exon COOR C/26518300-26518720,26518803-26519242 NOTE AF428458 HITS RAFL05-18-M18 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26518333-26518721,26518804-26518992 HITS R21835 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN Exon COOR C/26518356-26518720,26518803-26519235 NOTE AY093779 HITS GABI_010E04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 1e-07 LOCN 300-UTR3 COOR W/26518465-26518499 HITS SM_3_32234 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 9e-59 LOCN Exon COOR C/26518467-26518584 NOTE CS118945 HITS SM_3_15964 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL e-158 LOCN 300-UTR3 COOR W/26518489-26518770 NOTE CS103951 HITS SM_3_35973 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 300-UTR3 COOR W/26518489-26518954 NOTE CS122684 HITS U21835 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/26518511-26518720,26518803-26519153 NOTE BT002226 HITS RAFL05-03-I09 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR W/26518547-26518719,26518802-26519194,26519202-26519235 HITS SAIL_625_D11 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 8e-18 LOCN 300-UTR5 COOR C/26519342-26519392 HITS SM_3_34464 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 4e-23 LOCN 300-UTR5 COOR W/26519380-26519433 NOTE CS121175 HITS SAIL_244_F10 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 1e-35 LOCN 300-UTR5 COOR W/26519394-26519470 HITS SK25469 [Seq] [About SK collection] [Vector pSKI015] TYPE SK FST EVAL 1e-30 LOCN 300-UTR5 COOR W/26519401-26519468,26519401-26519468 HITS CSHL_GT9152 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN 1000-Promotor COOR C/26519416-26519969 HITS GABI_316B06 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 5e-80 LOCN 1000-Promotor COOR W/26519541-26519710 HITS GABI_349F04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL e-117 LOCN 1000-Promotor COOR W/26519747-26519978 HITS RAFL15-31-P11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.34 LOCN 1000-Promotor COOR W/26519774-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521697 HITS R50024 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 98.34 LOCN 1000-Promotor COOR W/26519774-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521697 NOTE BT003998 HITS GT_5_14950 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 1e-16 LOCN 1000-Promotor COOR C/26519789-26519848 NOTE CS175449 HITS AY086393 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN 1000-Promotor COOR W/26519806-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521637 HITS U50024 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN 1000-Promotor COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521490 NOTE BT005683 HITS G50024 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN 1000-Promotor COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521490 NOTE U50024 BT005683 pENTR_Sfi HITS CSHL_GT9152 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN 1000-Promotor COOR W/26519988-26520436