CODE At5g66390 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G66390.1 CDS gene_syn K1F13.4, K1F13_4 go_component endomembrane system|GO:0012505||IEA go_process response to oxidative stress|GO:0006979||IEA go_function peroxidase activity|GO:0004601||IEA go_function electron carrier activity|GO:0009055||IEA go_function heme binding|GO:0020037||IEA go_function peroxidase activity|GO:0004601||ISS product peroxidase 72 (PER72) (P72) (PRXR8) note peroxidase 72 (PER72) (P72) (PRXR8); FUNCTIONS IN: electron carrier activity, peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, flower, root; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: peroxidase, putative (TAIR:AT4G36430.1); Has 2940 Blast hits to 2923 proteins in 224 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 117; Plants - 2778; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). protein_id AT5G66390.1p transcript_id AT5G66390.1 protein_id AT5G66390.1p transcript_id AT5G66390.1 COOR C/26516063-26516481,26516567-26516732,26516807-26516998,26517096-26517329 HITS GABI_957B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL e-173 LOCN 300-UTR3 COOR C/26515518-26515836 HITS SALK_125621.55.50.x SALK T-DNA Homozygous Knockout Line for At5g66390 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL e-151 LOCN 300-UTR3 COOR W/26515796-26516065 NOTE At5g66390 HITS SALK_136893.44.70.x SALK T-DNA Homozygous Knockout Line for At5g66390 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL 0.0 LOCN 300-UTR3 COOR W/26515859-26516260 NOTE At5g66390 HITS GABI_957B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN 300-UTR3 COOR W/26515912-26516435 HITS BX832014 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/26515925-26516483,26516569-26516732,26516807-26516997,26517095-26517375 HITS BX832751 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/26515928-26516483,26516574-26516733,26516811-26516997,26517095-26517376 HITS RAFL14-30-F18 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.59 LOCN Exon COOR C/26515929-26516481,26516567-26516732,26516807-26516998,26517096-26517384 HITS X98320 [GenBank] TYPE Community cDNA EVAL 97.97 LOCN Exon COOR C/26515929-26516041,26516042-26516481,26516567-26516732,26516807-26516998,26517096-26517358 HITS X98774 [GenBank] TYPE Community cDNA EVAL 97.97 LOCN Exon COOR C/26515929-26516041,26516042-26516481,26516567-26516732,26516807-26516998,26517096-26517358 HITS RAFL14-30-F18 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/26515934-26516403 HITS BX831693 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/26515988-26516483,26516569-26516732,26516807-26516997,26517095-26517360 HITS U22969 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/26516063-26516481,26516567-26516732,26516807-26516998,26517096-26517329 NOTE BT008314 HITS G22969 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR C/26516063-26516481,26516567-26516732,26516807-26516998,26517096-26517329 NOTE U22969 BT008314 pENTR_Sfi HITS SALK_057660.54.50.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL e-145 LOCN Exon COOR W/26516090-26516441 HITS SALK_057660.39.50.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 1e-68 LOCN Exon COOR W/26516194-26516371 HITS SAIL_891_H09 SAIL T-DNA Homozygous Knockout Line for AT5G66390
[Seq] [SAIL HM Collection by Salk] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL T-DNA HM EVAL 2e-86 LOCN Intron COOR W/26516540-26516701 NOTE AT5G66390 HITS GABI_463D03 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 1e-51 LOCN Exon COOR W/26516724-26516825 HITS SM_3_1731 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN Exon COOR W/26517109-26517542 NOTE CS55104 HITS SALK_100153.24.50.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 3e-15 LOCN 300-UTR5 COOR W/26517504-26517543 HITS SALK_100154.30.40.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 3e-15 LOCN 300-UTR5 COOR W/26517504-26517543 HITS SALK_136089.37.55.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 3e-15 LOCN 300-UTR5 COOR W/26517504-26517543 HITS SALK_021790.23.20.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 4e-39 LOCN 1000-Promotor COOR C/26517549-26517657 HITS GABI_063G10 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL 9e-57 LOCN 1000-Promotor COOR W/26517640-26517776 NOTE k1l20 HITS GABI_063G10 GABI-Kat T-DNA Homozygous Knockout Line for IntergenetiC by Salk [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat HM EVAL 9e-57 LOCN 1000-Promotor COOR W/26517640-26517776 NOTE IntergenetiC HITS WiscDsLoxHs069_07D [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL 1e-40 LOCN 1000-Promotor COOR C/26517759-26517922 HITS SALK_072356.45.65.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 6e-72 LOCN 1000-Promotor COOR C/26517926-26518065 HITS SM_3_41613 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 1000-Promotor COOR W/26518070-26518393 NOTE CS128324 HITS SM_3_41620 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 1000-Promotor COOR W/26518070-26518399 NOTE CS128331 HITS GABI_010E04 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 4e-92 LOCN 1000-Promotor COOR W/26518157-26518311,26518407-26518581 HITS L04173 [GenBank] TYPE Community DNA EVAL 99.46 LOCN 1000-Promotor COOR C/26518236-26519835,26519839-26519914 HITS SM_3_24889 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 1000-Promotor COOR W/26518278-26518735 NOTE CS112845 HITS RAFL09-72-M06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 1000-Promotor COOR C/26518300-26518687 HITS RAFL09-86-L23 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 1000-Promotor COOR C/26518300-26518705 HITS R14927 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN 1000-Promotor COOR C/26518300-26518720,26518803-26519242 NOTE AF428458