CODE At5g55250 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G55250.2 CDS gene_syn IAA CARBOXYLMETHYLTRANSFERASE 1, IAMT1, MCO15.20, MCO15_20 gene IAMT1 function Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. go_component cellular_component|GO:0005575||ND go_process polarity specification of adaxial/abaxial axis|GO:0009944|16169896|IMP go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757|11287667|IMP go_function indole acetic acid carboxyl methyltransferase activity|GO:0051749|12897246|IDA product IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase/ indole acetic acid carboxyl methyltransferase note IAA CARBOXYLMETHYLTRANSFERASE 1 (IAMT1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, indole acetic acid carboxyl methyltransferase activity; INVOLVED IN: polarity specification of adaxial/abaxial axis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: GAMT2 (GIBBERELLIC ACID METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase (TAIR:AT5G56300.1); Has 628 Blast hits to 618 proteins in 99 species: Archae - 0; Bacteria - 52; Metazoa - 12; Fungi - 3; Plants - 445; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). protein_id AT5G55250.2p transcript_id AT5G55250.2 protein_id AT5G55250.2p transcript_id AT5G55250.2 COOR C/22407589-22407942,22409326-22409601,22409875-22410291 HITS RAFL15-18-N17 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 300-UTR3 COOR W/22406826-22406903,22406998-22407351 HITS RAFL22-17-N06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.10 LOCN Exon COOR C/22407484-22407942,22409326-22409601,22409875-22410294,22410744-22410913 HITS RAFL22-40-B20 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.95 LOCN Exon COOR C/22407484-22407942,22409326-22409601,22409875-22410294,22410744-22410913 HITS RAFL22-04-K17 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.38 LOCN Exon COOR C/22407540-22407942,22409326-22409601,22409875-22410294,22410744-22410918 HITS AY087665 [GenBank] TYPE Community cDNA EVAL 99.50 LOCN Exon COOR C/22407549-22407942,22409326-22409601,22409875-22410294,22410744-22410861 HITS BX829979 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/22407620-22407944,22409329-22409599,22409872-22410297 HITS GT_5_41946 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 5e-09 LOCN Exon COOR W/22407652-22407701 NOTE CS140111 HITS SAIL_679_F05 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 3e-05 LOCN Exon COOR W/22407806-22407919 HITS SAIL_679_G03 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 6e-43 LOCN Exon COOR W/22407809-22407924 HITS FLAG_101H08 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL e-143 LOCN Exon COOR W/22407818-22408090 HITS FLAG_103D05 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL e-143 LOCN Exon COOR W/22407818-22408090 HITS SAIL_397_H11 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 2e-06 LOCN Exon COOR W/22407902-22407929 HITS FLAG_471H09 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL 6e-13 LOCN Intron COOR C/22408167-22408202 HITS FLAG_378C10 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL 0.0 LOCN Intron COOR C/22409146-22409640 HITS SALK_072125.38.85.x SALK T-DNA Homozygous Knockout Line for At5g55250 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL 3e-28 LOCN Intron COOR C/22409195-22409262 NOTE At5g55250 HITS SAIL_34_C05 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL e-111 LOCN Intron COOR W/22409248-22409450 HITS SM_3_19908 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN Exon COOR W/22409880-22410321 NOTE CS108748 HITS RAFL22-17-N06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-111 LOCN Exon COOR W/22410060-22410297,22410747-22410854 HITS CSHL_GT7805 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL e-112 LOCN 1000-Promotor COOR C/22410608-22410860 HITS GABI_919G08 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 4e-42 LOCN 1000-Promotor COOR W/22411174-22411268 CODE At5g55250 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr5 TITL AT5G55250.1 CDS gene_syn IAA CARBOXYLMETHYLTRANSFERASE 1, IAMT1, MCO15.20, MCO15_20 gene IAMT1 function Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. go_component cellular_component|GO:0005575||ND go_process polarity specification of adaxial/abaxial axis|GO:0009944|16169896|IMP go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757|11287667|IMP go_function indole acetic acid carboxyl methyltransferase activity|GO:0051749|12897246|IDA product IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase/ indole acetic acid carboxyl methyltransferase note IAA CARBOXYLMETHYLTRANSFERASE 1 (IAMT1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, indole acetic acid carboxyl methyltransferase activity; INVOLVED IN: polarity specification of adaxial/abaxial axis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: GAMT2 (GIBBERELLIC ACID METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase (TAIR:AT5G56300.1); Has 638 Blast hits to 626 proteins in 100 species: Archae - 0; Bacteria - 52; Metazoa - 12; Fungi - 3; Plants - 450; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). protein_id AT5G55250.1p transcript_id AT5G55250.1 protein_id AT5G55250.1p transcript_id AT5G55250.1 COOR C/22407589-22407942,22409326-22409601,22409875-22410294,22410744-22410854 HITS RAFL15-18-N17 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 300-UTR3 COOR W/22406826-22406903,22406998-22407351 HITS RAFL22-17-N06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.10 LOCN Exon COOR C/22407484-22407942,22409326-22409601,22409875-22410294,22410744-22410913 HITS RAFL22-40-B20 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.95 LOCN Exon COOR C/22407484-22407942,22409326-22409601,22409875-22410294,22410744-22410913 HITS RAFL22-04-K17 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.38 LOCN Exon COOR C/22407540-22407942,22409326-22409601,22409875-22410294,22410744-22410918 HITS AY087665 [GenBank] TYPE Community cDNA EVAL 99.50 LOCN Exon COOR C/22407549-22407942,22409326-22409601,22409875-22410294,22410744-22410861 HITS BX829979 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/22407620-22407944,22409329-22409599,22409872-22410297 HITS GT_5_41946 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 5e-09 LOCN Exon COOR W/22407652-22407701 NOTE CS140111 HITS SAIL_679_F05 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 3e-05 LOCN Exon COOR W/22407806-22407919 HITS SAIL_679_G03 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 6e-43 LOCN Exon COOR W/22407809-22407924 HITS FLAG_101H08 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL e-143 LOCN Exon COOR W/22407818-22408090 HITS FLAG_103D05 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL e-143 LOCN Exon COOR W/22407818-22408090 HITS SAIL_397_H11 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 2e-06 LOCN Exon COOR W/22407902-22407929 HITS FLAG_471H09 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL 6e-13 LOCN Intron COOR C/22408167-22408202 HITS FLAG_378C10 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL 0.0 LOCN Intron COOR C/22409146-22409640 HITS SALK_072125.38.85.x SALK T-DNA Homozygous Knockout Line for At5g55250 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL 3e-28 LOCN Intron COOR C/22409195-22409262 NOTE At5g55250 HITS SAIL_34_C05 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL e-111 LOCN Intron COOR W/22409248-22409450 HITS SM_3_19908 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN Exon COOR W/22409880-22410321 NOTE CS108748 HITS RAFL22-17-N06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-111 LOCN Exon COOR W/22410060-22410297,22410747-22410854 HITS CSHL_GT7805 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL e-112 LOCN 300-UTR5 COOR C/22410608-22410860 HITS GABI_919G08 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 4e-42 LOCN 1000-Promotor COOR W/22411174-22411268