CODE At3g11520 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr3 TITL AT3G11520.1 CDS gene_syn CYC2, CYCB1;3, CYCLIN 2, CYCLIN B1;3 gene CYCB1;3 function Encodes a B-type mitotic cyclin. go_component nucleus|GO:0005634||IEA go_process cell cycle|GO:0007049|8938409|IEP go_process response to cyclopentenone|GO:0010583|18334669|IEP go_process regulation of cell cycle|GO:0051726||ISS go_function cyclin-dependent protein kinase regulator activity|GO:0016538||ISS product CYCB1;3 (CYCLIN B1;3); cyclin-dependent protein kinase regulator note CYCLIN B1;3 (CYCB1;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to cyclopentenone, regulation of cell cycle, cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYC1BAT; cyclin-dependent protein kinase regulator (TAIR:AT5G06150.1); Has 3453 Blast hits to 3452 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 380; Plants - 756; Viruses - 38; Other Eukaryotes - 500 (source: NCBI BLink). protein_id AT3G11520.1p transcript_id AT3G11520.1 protein_id AT3G11520.1p transcript_id AT3G11520.1 COOR C/3625475-3625619,3625708-3626294,3626387-3626488,3626568-3626938,3627100-3627139 HITS RAFL14-50-H19 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-162 LOCN Exon COOR C/3625327-3625619,3625708-3625861 HITS RAFL14-50-H19 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.33 LOCN Exon COOR C/3625327-3625619,3625708-3626294,3626387-3626488,3626568-3626938,3627100-3627230 HITS BX822256 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/3625364-3625619,3625704-3626294,3626387-3626486,3626554-3626940,3627101-3627217 HITS BX824116 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/3625367-3625618,3625703-3626295,3626388-3626487,3626567-3626940,3627102-3627210 HITS BX822102 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/3625369-3625618,3625707-3626295,3626388-3626487,3626567-3626940,3627102-3627219 HITS BX822409 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/3625373-3625617,3625704-3626295,3626385-3626490,3626598-3626936,3627098-3627203 HITS BX824697 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/3625380-3625618,3625707-3626295,3626388-3626486,3626567-3626940,3627102-3627191 HITS U23217 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/3625475-3625619,3625708-3626294,3626387-3626488,3626568-3626938,3627100-3627139 NOTE BT006437 HITS G23217 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR C/3625475-3625619,3625708-3626294,3626387-3626488,3626568-3626938,3627100-3627139 NOTE U23217 BT006437 pENTR_Sfi HITS GABI_352C11 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL 2e-88 LOCN Exon COOR W/3625520-3625683 NOTE at3g11520 HITS GT_3_9341 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 2e-78 LOCN Intron COOR W/3625663-3625809 NOTE CS174934 HITS X94218 [GenBank] TYPE Community cDNA EVAL 91.10 LOCN Exon COOR W/3625801-3625810,3672183-3672395,3672779-3672855,3673039-3673096,3673192-3673271,3673396-3673521,3673616-3673730,3673841-3673938 HITS RATM13-2256-1_G [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL 3e-97 LOCN Exon COOR W/3626794-3626980 HITS GABI_859B01 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL e-178 LOCN 300-UTR5 COOR C/3626807-3627157 NOTE at3g11520 HITS SALK_026335.49.15.x SALK T-DNA Homozygous Knockout Line for At3g11520 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL 0.0 LOCN 300-UTR5 COOR C/3626839-3627231 NOTE At3g11520 HITS GABI_730C01 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL 0.0 LOCN 300-UTR5 COOR C/3626866-3627199 NOTE at3g11520 HITS CSHL_GT12471 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 2e-82 LOCN 300-UTR5 COOR C/3627199-3627352 HITS GT_5_108331 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 0.0 LOCN 300-UTR5 COOR W/3627272-3627635 NOTE CS170258 HITS CSHL_GT12471 [Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST EVAL 0.0 LOCN 300-UTR5 COOR W/3627348-3627951 HITS SALK_016509.48.55.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 4e-48 LOCN 1000-Promotor COOR W/3627539-3627643 HITS WiscDsLoxHs185_05H [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL 3e-11 LOCN 1000-Promotor COOR W/3627793-3627845 HITS GT_5_102208 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 9e-62 LOCN 1000-Promotor COOR W/3627882-3628004 NOTE CS165788 HITS GT_5_102188 [Seq] [JIC SM] [Order from ABRC] [Order from NASC] [PCR] TYPE JIC SM Line EVAL 3e-39 LOCN 1000-Promotor COOR W/3628037-3628117 NOTE CS165768