CODE At1g68050 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr1 TITL AT1G68050.1 CDS gene_syn ADO3, FKF1, FLAVIN-BINDING, KELCH REPEAT, F BOX 1, T23K23.10, T23K23_10 gene FKF1 function Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression. go_function two-component sensor activity|GO:0000155||IEA go_function signal transducer activity|GO:0004871||IEA go_component cellular_component|GO:0005575|10847687|ND go_process ubiquitin-dependent protein catabolic process|GO:0006511|11019805|TAS go_process circadian rhythm|GO:0007623|10847687|IMP go_process circadian rhythm|GO:0007623|17872410|IDA go_process circadian rhythm|GO:0007623||ISS go_process response to blue light|GO:0009637|17872410|IDA go_process positive regulation of flower development|GO:0009911|10847687|IMP go_process regulation of transcription|GO:0045449|17872410|IDA go_function ubiquitin-protein ligase activity|GO:0004842||ISS product FKF1 (FLAVIN-BINDING, KELCH REPEAT, F BOX 1); signal transducer/ two-component sensor/ ubiquitin-protein ligase note FLAVIN-BINDING, KELCH REPEAT, F BOX 1 (FKF1); FUNCTIONS IN: ubiquitin-protein ligase activity, two-component sensor activity, signal transducer activity; INVOLVED IN: positive regulation of flower development, response to blue light, circadian rhythm, regulation of transcription, ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: whole plant, male gametophyte, root tip, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), PAC motif (InterPro:IPR001610), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), PAS-associated, C-terminal (InterPro:IPR000700), PAS fold-3 (InterPro:IPR013655), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: ZTL (ZEITLUPE); protein binding / ubiquitin-protein ligase (TAIR:AT5G57360.1); Has 5899 Blast hits to 3930 proteins in 528 species: Archae - 53; Bacteria - 1433; Metazoa - 1930; Fungi - 611; Plants - 951; Viruses - 0; Other Eukaryotes - 921 (source: NCBI BLink). protein_id AT1G68050.1p transcript_id AT1G68050.1 protein_id AT1G68050.1p transcript_id AT1G68050.1 COOR W/25508737-25509008,25509110-25510697 HITS WiscDsLoxHs026_09D [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL 0.0 LOCN 1000-Promotor COOR C/25507013-25507895 HITS WiscDsLoxHs026_09C [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL 0.0 LOCN 1000-Promotor COOR C/25507015-25507886 HITS WiscDsLoxHs026_09B [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL 0.0 LOCN 1000-Promotor COOR C/25507135-25507968 HITS SAIL_785_F11 [Seq] [About SAIL] [Order from ABRC] [Order from NASC] TYPE SAIL FST EVAL 0.0 LOCN 1000-Promotor COOR C/25507268-25507956 HITS SALK_080647.52.75.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 0.0 LOCN 1000-Promotor COOR C/25507435-25507844 HITS WiscDsLox385F09 [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL e-143 LOCN 300-UTR5 COOR C/25507778-25508494 HITS FLAG_411D06 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL 0.0 LOCN 1000-Promotor COOR W/25507869-25508416 HITS FLAG_487G02 [Seq] [About INRA/FLAG FST] [FLAGdb] [Publication] [pGKB5 Vector] [Order from INRA] TYPE FLAG FST EVAL 0.0 LOCN 1000-Promotor COOR W/25507871-25508521 HITS GABI_543H10 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 6e-36 LOCN 1000-Promotor COOR C/25507954-25508057 HITS GABI_625B12 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 8e-41 LOCN 1000-Promotor COOR C/25507954-25508057 HITS GABI_544F04 [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat Confirmed EVAL 3e-25 LOCN 1000-Promotor COOR C/25507955-25508016 NOTE at2g42200 HITS GABI_366E01 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN 1000-Promotor COOR C/25507955-25508308 HITS GABI_622H12 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 9e-30 LOCN 1000-Promotor COOR C/25507955-25508027 HITS GABI_636B03 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 9e-05 LOCN 1000-Promotor COOR C/25507955-25508013 HITS GABI_377E01 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 2e-06 LOCN 1000-Promotor COOR C/25507959-25507983 HITS GABI_544G02 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 7e-21 LOCN 1000-Promotor COOR C/25507960-25508009 HITS GABI_642B08 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 8e-27 LOCN 1000-Promotor COOR C/25507974-25508049 HITS RATM11-3287-1_G [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL e-168 LOCN 300-UTR5 COOR C/25508387-25508693 HITS RATM53-2776-1_H [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL e-102 LOCN 300-UTR5 COOR C/25508388-25508590 HITS GABI_565F01 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 3e-22 LOCN 1000-Promotor COOR W/25508401-25508453 HITS GABI_699G12 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 6e-19 LOCN 1000-Promotor COOR W/25508404-25508450 HITS RATM53-2776-1_G [Seq] [RARGE] [Order] TYPE RIKEN FST EVAL 0.0 LOCN 300-UTR5 COOR W/25508603-25509100 HITS R21203 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.95 LOCN Exon COOR W/25508676-25509008,25509110-25510880 NOTE AY064999 HITS SALK_083361.39.15.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL 5e-86 LOCN 300-UTR5 COOR W/25508679-25508874 HITS AF216523 [GenBank] TYPE Community cDNA EVAL 99.90 LOCN Exon COOR W/25508712-25509008,25509110-25510878 HITS AF252296 [GenBank] TYPE Community cDNA EVAL 99.90 LOCN Exon COOR W/25508712-25509008,25509110-25510878 HITS U21203 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR W/25508737-25509008,25509110-25510697 NOTE AY113029 HITS G21203 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR W/25508737-25509008,25509110-25510697 NOTE U21203 AY113029 pENTR_Sfi HITS BX815970 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR W/25510001-25510884 HITS DX573828 [NCBI] TYPE Community FST EVAL 0.0 LOCN Exon COOR C/25510116-25510681 HITS SALK_059480.17.55.x SALK T-DNA Homozygous Knockout Line for At1g68050 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL 7e-15 LOCN Exon COOR C/25510159-25510234 NOTE At1g68050 HITS RAFL07-18-B18 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR W/25510457-25510878