CODE At1g68010 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr1 TITL AT1G68010.1 CDS gene_syn HPR gene HPR function Encodes hydroxypyruvate reductase. go_component peroxisome|GO:0005777|12154131|IDA go_component peroxisome|GO:0005777|17951448|IDA go_component chloroplast|GO:0009507|18431481|IDA go_component apoplast|GO:0048046|18538804|IDA go_component peroxisome|GO:0005777|9177031|IDA go_process photorespiration|GO:0009853|9177031|TAS go_function poly(U) binding|GO:0008266|17511964|IDA go_function glycerate dehydrogenase activity|GO:0008465|12154131|NAS product HPR; glycerate dehydrogenase/ poly(U) binding note HPR; FUNCTIONS IN: glycerate dehydrogenase activity, poly(U) binding; INVOLVED IN: photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 18427 Blast hits to 18426 proteins in 1512 species: Archae - 281; Bacteria - 8815; Metazoa - 656; Fungi - 736; Plants - 302; Viruses - 5; Other Eukaryotes - 7632 (source: NCBI BLink). protein_id AT1G68010.1p transcript_id AT1G68010.1 protein_id AT1G68010.1p transcript_id AT1G68010.1 COOR W/25493418-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495720 HITS SALK_125186.37.65.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL e-100 LOCN 1000-Promotor COOR C/25492572-25492779 HITS GABI_281B11 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 0.0 LOCN 300-UTR5 COOR C/25492629-25493124 HITS RAFL09-96-A14 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 8e-40 LOCN 1000-Promotor COOR W/25492681-25492776,25492868-25492959,25492968-25493043 HITS SALK_016755.56.00.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL e-149 LOCN 1000-Promotor COOR C/25492767-25493037 HITS RAFL04-13-N06 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-102 LOCN Exon COOR C/25493353-25493540,25493634-25493715,25493796-25493939,25494039-25494161,25494254-25494335 HITS R09542 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 98.80 LOCN Exon COOR W/25493353-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495894 NOTE AF370221 HITS D85339 [GenBank] TYPE Community cDNA EVAL 98.74 LOCN Exon COOR W/25493354-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495907 HITS R24496 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN Exon COOR W/25493361-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495878 NOTE AY099552 HITS BX814872 [GenBank] [Order] TYPE GSLT cDNA EVAL 6e-81 LOCN Exon COOR W/25493388-25493540,25493634-25493715,25493796-25493939,25494039-25494161,25494254-25494335,25494425-25494492,25494578-25494672,25494762-25494834,25494906-25495016,25495104-25495180,25495266-25495309,25495395-25495507,25495696-25495851 HITS U09542 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR W/25493418-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495751 NOTE AY113871 HITS U24496 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP Gateway Clone EVAL 100.00 LOCN Exon COOR W/25493418-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495753 NOTE U24496 BT001237 pENTR-TOPO HITS G09542 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR W/25493418-25493540,25493634-25493717,25493798-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495751 NOTE U09542 AY113871 pENTR_Sfi HITS SALK_067724.42.10.x SALK T-DNA Homozygous Knockout Line for At1g68010 [seq] [Salk HM Collection] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA HM EVAL e-125 LOCN Intron COOR W/25493745-25494022 NOTE At1g68010 HITS RAFL22-11-L03 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.68 LOCN Exon COOR W/25493895-25493938,25494038-25494159,25494252-25494333,25494423-25494495,25494581-25494672,25494762-25494836,25494908-25495015,25495103-25495180,25495266-25495310,25495395-25495509,25495698-25495906 HITS SALK_143584.48.40.x [seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC] TYPE SALK T-DNA EVAL e-137 LOCN Exon COOR W/25494431-25494684 HITS RAFL09-27-I24 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 2e-83 LOCN Exon COOR W/25495125-25495179,25495268-25495310,25495395-25495507,25495696-25495864 HITS RAFL09-38-J02 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 4e-94 LOCN Exon COOR W/25495264-25495310,25495395-25495507,25495696-25495905 HITS RAFL09-42-M24 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 1e-41 LOCN Exon COOR W/25495264-25495310,25495395-25495502,25495698-25495879 HITS BX817734 [GenBank] [Order] TYPE GSLT cDNA EVAL 7e-96 LOCN Exon COOR W/25495264-25495310,25495395-25495507,25495696-25495876 HITS RAFL09-88-K14 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-149 LOCN Exon COOR W/25495422-25495507,25495700-25495988 HITS RAFL09-79-M01 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 2e-90 LOCN Exon COOR W/25495481-25495507,25495696-25495921 HITS WiscDsLox297300_22C [Seq] [Wisc & Vector] [Order from ABRC] TYPE Wisc FST EVAL e-107 LOCN 300-UTR3 COOR C/25495700-25495914 HITS GABI_081E05 [Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] TYPE GABI-Kat FST EVAL 3e-40 LOCN 300-UTR3 COOR W/25495835-25495945