CLON SALK_079499.51.05.x[seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC]  
TYPE SALK T-DNA
CHRO chr1
EVAL 3e-42
COOR W/24891076-24891161

HITS At1g66730[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G66730.1 CDS  gene_syn F4N21.14, F4N21_14  go_component chloroplast|GO:0009507||IEA  go_process DNA replication|GO:0006260||IEA  go_process DNA repair|GO:0006281||IEA  go_process DNA recombination|GO:0006310||IEA  go_function DNA binding|GO:0003677||IEA  go_function DNA ligase (ATP) activity|GO:0003910||IEA  go_function ATP binding|GO:0005524||IEA  go_process DNA replication|GO:0006260||ISS  go_process DNA repair|GO:0006281||ISS  go_process DNA recombination|GO:0006310||ISS  go_function DNA ligase (ATP) activity|GO:0003910||ISS  go_function ATP binding|GO:0005524||ISS  product ATP dependent DNA ligase family protein  note ATP dependent DNA ligase family protein; FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977); BEST Arabidopsis thaliana protein match is: ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1); ATP binding / DNA binding / DNA ligase (ATP) (TAIR:AT1G08130.1); Has 3133 Blast hits to 3071 proteins in 628 species: Archae - 227; Bacteria - 996; Metazoa - 564; Fungi - 431; Plants - 130; Viruses - 148; Other Eukaryotes - 637 (source: NCBI BLink).  protein_id AT1G66730.1p  transcript_id AT1G66730.1  protein_id AT1G66730.1p  transcript_id AT1G66730.1  
LOCN Exon
COOR W/24884991-24887259,24887435-24887552,24887644-24887725,24887811-24887913,24888016-24888112,24888399-24888501,24888579-24888710,24888833-24888880,24889194-24889291,24889382-24889447,24889692-24889851,24890027-24890134,24890352-24890401,24890494-24890528,24890634-24890707,24890803-24890964,24891044-24891132,24891264-24891414,24891515-24891823