CLON SALK_000971.54.50.x[seq] [About & Citation] [Vector] [analysis] [Order from ABRC] [Order from NASC]  
TYPE SALK T-DNA
CHRO chr1
EVAL 2e-57
COOR C/5210045-5210156,5210215-5210236

HITS At1g15130[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G15130.1 CDS  gene_syn F9L1.7, F9L1_7  product hydroxyproline-rich glycoprotein family protein  note hydroxyproline-rich glycoprotein family protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 24106 Blast hits to 13529 proteins in 779 species: Archae - 27; Bacteria - 1802; Metazoa - 9356; Fungi - 3772; Plants - 5606; Viruses - 598; Other Eukaryotes - 2945 (source: NCBI BLink).  protein_id AT1G15130.1p  transcript_id AT1G15130.1  protein_id AT1G15130.1p  transcript_id AT1G15130.1  
LOCN 1000-Promotor
COOR C/5206217-5206687,5206851-5206954,5207144-5207192,5207379-5207519,5207618-5207686,5207781-5207870,5208084-5209034,5209183-5209848
HITS At1g15140[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G15140.1 CDS  gene_syn F9L1.8, F9L1_8  go_component chloroplast|GO:0009507|18431481|IDA  go_component chloroplast stroma|GO:0009570|16207701|IDA  go_component chloroplast stroma|GO:0009570|18633119|IDA  go_component thylakoid|GO:0009579|16648217|IDA  go_component chloroplast envelope|GO:0009941|12938931|IDA  go_function electron carrier activity|GO:0009055||IEA  go_function oxidoreductase activity|GO:0016491||IEA  go_function oxidoreductase activity|GO:0016491||ISS  product oxidoreductase NAD-binding domain-containing protein  note oxidoreductase NAD-binding domain-containing protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding (TAIR:AT1G20020.3); Has 4066 Blast hits to 4066 proteins in 971 species: Archae - 52; Bacteria - 3026; Metazoa - 11; Fungi - 136; Plants - 246; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink).  protein_id AT1G15140.1p  transcript_id AT1G15140.1  protein_id AT1G15140.1p  transcript_id AT1G15140.1  
LOCN 300-UTR3
COOR C/5210403-5210465,5210549-5210629,5210714-5210809,5210972-5211071,5211590-5212137