CLON RAFL09-98-J21[NCBI] [Order from RIKEN BRC] 
TYPE RIKEN EST
CHRO chr1
EVAL e-148
COOR W/19839734-19839761,19839854-19840123,19840133-19840225

HITS AT1G53190.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [NCBI] [KEGG] [Protein Interaction] [AtGene Express] [AtGDB View] 
[e-FP Browser] [AthaMap] [Phosphat] [Methylome] [UToronto BAR Expression Angler] [Araport ] [TAIR ]
Genome Browsers: [1001 Genomes] [1001 Epigenomes] [ABA TF Network] TYPE Gene TITL AT1G53190.1 CDS AT1G53190 ID=AT1G53190.1; Parent=AT1G53190; Name=AT1G53190.1; Note=RING/U-box superfamily protein; conf_class=2; computational_description=RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2)%3B Has 8436 Blast hits to 8420 proteins in 276 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2403%3B Fungi - 639%3B Plants - 3969%3B Viruses - 29%3B Other Eukaryotes - 1396 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11983057, PMID:14756312, locus:2009660; locus_type=protein_coding LOCN Exon COOR W/19838072-19838744,19838823-19839214,19839310-19839414,19839597-19839764,19839857-19840003 HITS AT1G53190.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [NCBI] [KEGG] [Protein Interaction] [AtGene Express] [AtGDB View]
[e-FP Browser] [AthaMap] [Phosphat] [Methylome] [UToronto BAR Expression Angler] [Araport ] [TAIR ]
Genome Browsers: [1001 Genomes] [1001 Epigenomes] [ABA TF Network] TYPE Gene TITL AT1G53190.2 CDS AT1G53190 ID=AT1G53190.2; Parent=AT1G53190; Name=AT1G53190.2; Note=RING/U-box superfamily protein; conf_class=2; computational_description=RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2)%3B Has 8436 Blast hits to 8420 proteins in 276 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2403%3B Fungi - 639%3B Plants - 3969%3B Viruses - 29%3B Other Eukaryotes - 1396 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11983057, PMID:14756312, locus:2009660; locus_type=protein_coding LOCN Exon COOR W/19838072-19838744,19838823-19839214,19839310-19839414,19839597-19839764,19839857-19840003 HITS AT1G53200.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [NCBI] [KEGG] [Protein Interaction] [AtGene Express] [AtGDB View]
[e-FP Browser] [AthaMap] [Phosphat] [Methylome] [UToronto BAR Expression Angler] [Araport ] [TAIR ]
Genome Browsers: [1001 Genomes] [1001 Epigenomes] [ABA TF Network] TYPE Gene TITL AT1G53200.1 CDS AT1G53200 ID=AT1G53200.1; Parent=AT1G53200; Name=AT1G53200.1; Note=TAF RNA polymerase I subunit A; conf_class=2; computational_description=unknown protein%3B Has 21 Blast hits to 21 proteins in 9 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 19%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:20226671, locus:2009570; locus_type=protein_coding LOCN 300-UTR3 COOR C/19840486-19840970,19841067-19841197,19841312-19841397,19841526-19841689,19841780-19842213,19842435-19842517,19842634-19842741,19842819-19843169 HITS AT1G53200.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [NCBI] [KEGG] [Protein Interaction] [AtGene Express] [AtGDB View]
[e-FP Browser] [AthaMap] [Phosphat] [Methylome] [UToronto BAR Expression Angler] [Araport ] [TAIR ]
Genome Browsers: [1001 Genomes] [1001 Epigenomes] [ABA TF Network] TYPE Gene TITL AT1G53200.2 CDS AT1G53200 ID=AT1G53200.2; Parent=AT1G53200; Name=AT1G53200.2; Note=TAF RNA polymerase I subunit A; conf_class=3; computational_description=unknown protein%3B Has 21 Blast hits to 21 proteins in 9 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 19%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:20226671, locus:2009570; locus_type=protein_coding LOCN 300-UTR3 COOR C/19840486-19840970,19841067-19841197,19841312-19841397,19841526-19841689,19841780-19842213,19842435-19842517,19842651-19842692