CLON RAFL05-18-M18[NCBI] [Order from RIKEN BRC] 
TYPE RIKEN EST
CHRO chr5
EVAL 0.0
COOR C/26518333-26518721,26518804-26518992

HITS At5g66400[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT5G66400.2 CDS  gene_syn ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, ATDI8, K1F13.5, K1F13_5, RAB18, RESPONSIVE TO ABA 18  gene RAB18  function Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.  go_component cellular_component|GO:0005575||ND  go_process response to stress|GO:0006950|7948863|IEP  go_process response to water deprivation|GO:0009414|7823904|IEP  go_process cold acclimation|GO:0009631|15356392|IGI  go_process response to abscisic acid stimulus|GO:0009737|1463831|IEP  go_process response to 1-Aminocyclopropane-1-carboxylic Acid|GO:0009961|16024687|IEP  go_function molecular_function|GO:0003674||ND  product RAB18 (RESPONSIVE TO ABA 18)  note RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to water deprivation, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); Has 50699 Blast hits to 19024 proteins in 1300 species: Archae - 44; Bacteria - 15736; Metazoa - 16335; Fungi - 3034; Plants - 6644; Viruses - 531; Other Eukaryotes - 8375 (source: NCBI BLink).  protein_id AT5G66400.2p  transcript_id AT5G66400.2  protein_id AT5G66400.2p  transcript_id AT5G66400.2  
LOCN Exon
COOR C/26518511-26518717,26518803-26519153
HITS At5g66400[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT5G66400.1 CDS  gene_syn ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, ATDI8, K1F13.5, K1F13_5, RAB18, RESPONSIVE TO ABA 18  gene RAB18  function Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.  go_component cellular_component|GO:0005575||ND  go_process response to stress|GO:0006950|7948863|IEP  go_process response to water deprivation|GO:0009414|7823904|IEP  go_process cold acclimation|GO:0009631|15356392|IGI  go_process response to abscisic acid stimulus|GO:0009737|1463831|IEP  go_process response to 1-Aminocyclopropane-1-carboxylic Acid|GO:0009961|16024687|IEP  go_function molecular_function|GO:0003674||ND  product RAB18 (RESPONSIVE TO ABA 18)  note RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to water deprivation, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); Has 49883 Blast hits to 18155 proteins in 1224 species: Archae - 38; Bacteria - 15309; Metazoa - 16363; Fungi - 3076; Plants - 6521; Viruses - 510; Other Eukaryotes - 8066 (source: NCBI BLink).  protein_id AT5G66400.1p  transcript_id AT5G66400.1  protein_id AT5G66400.1p  transcript_id AT5G66400.1  
LOCN Exon
COOR C/26518511-26518720,26518803-26519153
HITS At5g66410[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT5G66410.1 CDS  gene_syn K1F13.6, K1F13_6, PLP3b, Phosducin-like protein 3 homolog  gene PLP3b  function Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.  go_component cellular_component|GO:0005575||ND  go_process nuclear division|GO:0000280|18390592|IGI  go_process cytokinesis|GO:0000910|18390592|IGI  go_process nucleolus organization|GO:0007000|18390592|IGI  go_process cortical microtubule organization|GO:0043622|18390592|IGI  go_process anisotropic cell growth|GO:0051211|18390592|IGI  go_function beta-tubulin binding|GO:0048487|18390592|ISS  product PLP3b (Phosducin-like protein 3 homolog); beta-tubulin binding  note Phosducin-like protein 3 homolog (PLP3b); FUNCTIONS IN: beta-tubulin binding; INVOLVED IN: cortical microtubule organization, nucleolus organization, nuclear division, anisotropic cell growth, cytokinesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PLP3a (Phosducin-like protein 3 homolog); beta-tubulin binding (TAIR:AT3G50960.1); Has 702 Blast hits to 698 proteins in 164 species: Archae - 6; Bacteria - 33; Metazoa - 338; Fungi - 105; Plants - 84; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).  protein_id AT5G66410.1p  transcript_id AT5G66410.1  protein_id AT5G66410.1p  transcript_id AT5G66410.1  
LOCN 1000-Promotor
COOR W/26519909-26519992,26520297-26520371,26520480-26520527,26520630-26520772,26520861-26520933,26521012-26521073,26521172-26521269,26521350-26521459