CLON RAFL05-07-B07[NCBI] [Order from RIKEN BRC] 
TYPE RIKEN EST
CHRO chr1
EVAL 0.0
COOR W/25499759-25499861,25499951-25500361

HITS At1g68020[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G68020.2 CDS  gene_syn ATTPS6, T23K23.13, T23K23_13, TPS6, TREHALOSE -6-PHOSPHATASE SYNTHASE S6  gene ATTPS6  function Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.  go_process trehalose biosynthetic process|GO:0005992|17981987|IGI  go_process trehalose biosynthetic process|GO:0005992||ISS  go_function alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity|GO:0003825|17981987|IGI  go_function trehalose-phosphatase activity|GO:0004805|17981987|IGI  go_function trehalose-phosphatase activity|GO:0004805||ISS  go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS  product ATTPS6; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase  note ATTPS6; FUNCTIONS IN: transferase activity, transferring glycosyl groups, alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: ATTPS5; protein binding / transferase, transferring glycosyl groups / trehalose-phosphatase (TAIR:AT4G17770.1); Has 2422 Blast hits to 2382 proteins in 629 species: Archae - 31; Bacteria - 1159; Metazoa - 97; Fungi - 469; Plants - 291; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink).  protein_id AT1G68020.2p  transcript_id AT1G68020.2  protein_id AT1G68020.2p  transcript_id AT1G68020.2  
LOCN Exon
COOR W/25497493-25499513,25499591-25499864,25499954-25500241
HITS At1g68020[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G68020.1 CDS  gene_syn ATTPS6, T23K23.13, T23K23_13, TPS6, TREHALOSE -6-PHOSPHATASE SYNTHASE S6  gene ATTPS6  function Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.  go_component membrane|GO:0016020||IEA  go_process trehalose biosynthetic process|GO:0005992|17981987|IGI  go_process trehalose biosynthetic process|GO:0005992||ISS  go_function alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity|GO:0003825|17981987|IGI  go_function trehalose-phosphatase activity|GO:0004805|17981987|IGI  go_function trehalose-phosphatase activity|GO:0004805||ISS  go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS  product ATTPS6; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase  note ATTPS6; FUNCTIONS IN: transferase activity, transferring glycosyl groups, alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: ATTPS5; protein binding / transferase, transferring glycosyl groups / trehalose-phosphatase (TAIR:AT4G17770.1); Has 2123 Blast hits to 2096 proteins in 590 species: Archae - 31; Bacteria - 1011; Metazoa - 97; Fungi - 459; Plants - 193; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink).  protein_id AT1G68020.1p  transcript_id AT1G68020.1  protein_id AT1G68020.1p  transcript_id AT1G68020.1  
LOCN 300-UTR3
COOR W/25497493-25499595
HITS At1g68030[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G68030.1 CDS  gene_syn T23K23.12, T23K23_12  go_function protein binding|GO:0005515||IEA  go_function zinc ion binding|GO:0008270||IEA  go_component cellular_component|GO:0005575||ND  go_process biological_process|GO:0008150||ND  product PHD finger protein-related  note PHD finger protein-related; FUNCTIONS IN: protein binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT1G14770.2); Has 37 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 11; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).  protein_id AT1G68030.1p  transcript_id AT1G68030.1  protein_id AT1G68030.1p  transcript_id AT1G68030.1  
LOCN 300-UTR3
COOR C/25500378-25500896,25500975-25501082,25501156-25501349,25501421-25501544