CLON R21362[SSP] [About & Citation] [NCBI] [Order] - click RAFL 
TYPE SSP cDNA
CHRO chr3
EVAL 100.00
COOR C/3610149-3610340,3610428-3610557,3610705-3610809,3610895-3611050,3611149-3611250,3611340-3611407,3611729-3611904,3612009-3612115,3612254-3612354
NOTE AY070484

HITS At3g11460[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT3G11460.1 CDS  go_process biological_process|GO:0008150||ND  product pentatricopeptide (PPR) repeat-containing protein  note pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G30700.1); Has 14044 Blast hits to 5114 proteins in 165 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 51; Plants - 13649; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink).  protein_id AT3G11460.1p  transcript_id AT3G11460.1  protein_id AT3G11460.1p  transcript_id AT3G11460.1  
LOCN 300-UTR3
COOR W/3608250-3610121
HITS At3g11470[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT3G11470.2 CDS  go_process macromolecule biosynthetic process|GO:0009059||IEA  go_function magnesium ion binding|GO:0000287||IEA  go_function holo-[acyl-carrier-protein] synthase activity|GO:0008897||IEA  go_process metabolic process|GO:0008152||ISS  go_function transferase activity|GO:0016740||ISS  product 4'-phosphopantetheinyl transferase family protein  note 4'-phosphopantetheinyl transferase family protein; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: holo-[acyl-carrier-protein] synthase/ magnesium ion binding (TAIR:AT2G02770.1); Has 1071 Blast hits to 1071 proteins in 436 species: Archae - 4; Bacteria - 863; Metazoa - 85; Fungi - 9; Plants - 35; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).  protein_id AT3G11470.2p  transcript_id AT3G11470.2  protein_id AT3G11470.2p  transcript_id AT3G11470.2  
LOCN Exon
COOR C/3610261-3610340,3610428-3610557,3610705-3610809,3610895-3611050,3611149-3611250,3611340-3611402,3611724-3611904,3612009-3612094
HITS At3g11470[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT3G11470.3 CDS  go_process macromolecule biosynthetic process|GO:0009059||IEA  go_function magnesium ion binding|GO:0000287||IEA  go_function holo-[acyl-carrier-protein] synthase activity|GO:0008897||IEA  go_process metabolic process|GO:0008152||ISS  go_function transferase activity|GO:0016740||ISS  product 4'-phosphopantetheinyl transferase family protein  note 4'-phosphopantetheinyl transferase family protein; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: holo-[acyl-carrier-protein] synthase/ magnesium ion binding (TAIR:AT2G02770.1); Has 980 Blast hits to 980 proteins in 420 species: Archae - 0; Bacteria - 795; Metazoa - 81; Fungi - 8; Plants - 33; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).  protein_id AT3G11470.3p  transcript_id AT3G11470.3  protein_id AT3G11470.3p  transcript_id AT3G11470.3  
LOCN Exon
COOR C/3610261-3610340,3610428-3610557,3610705-3610809,3610895-3611050,3611149-3611250,3611340-3611402,3611729-3611788
HITS At3g11470[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT3G11470.1 CDS  go_process macromolecule biosynthetic process|GO:0009059||IEA  go_function magnesium ion binding|GO:0000287||IEA  go_function holo-[acyl-carrier-protein] synthase activity|GO:0008897||IEA  go_process metabolic process|GO:0008152||ISS  go_function transferase activity|GO:0016740||ISS  product 4'-phosphopantetheinyl transferase family protein  note 4'-phosphopantetheinyl transferase family protein; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: holo-[acyl-carrier-protein] synthase/ magnesium ion binding (TAIR:AT2G02770.1); Has 1070 Blast hits to 1070 proteins in 436 species: Archae - 2; Bacteria - 864; Metazoa - 83; Fungi - 13; Plants - 35; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).  protein_id AT3G11470.1p  transcript_id AT3G11470.1  protein_id AT3G11470.1p  transcript_id AT3G11470.1  
LOCN Exon
COOR C/3610261-3610340,3610428-3610557,3610705-3610809,3610895-3611050,3611149-3611250,3611340-3611407,3611729-3611904,3612009-3612094