CLON GABI_381F04[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr5
EVAL 2e-16
COOR C/21618791-21618893

HITS At5g53290[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT5G53290.1 CDS  gene_syn CRF3, CYTOKININ RESPONSE FACTOR 3, K19E1.9, K19E1_9  gene CRF3  function encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.  go_component nucleus|GO:0005634||ISS  go_process regulation of transcription, DNA-dependent|GO:0006355||ISS  go_process transcription factor import into nucleus|GO:0042991|16832061|IDA  go_process leaf development|GO:0048366|16832061|IMP  go_process cotyledon development|GO:0048825|16832061|IMP  go_function DNA binding|GO:0003677||ISS  go_function transcription factor activity|GO:0003700|11118137|ISS  go_function transcription factor activity|GO:0003700||ISS  product CRF3 (CYTOKININ RESPONSE FACTOR 3); DNA binding / transcription factor  note CYTOKININ RESPONSE FACTOR 3 (CRF3); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: cotyledon development, regulation of transcription, DNA-dependent, leaf development, transcription factor import into nucleus; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, root, leaf; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor and ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: CRF4 (CYTOKININ RESPONSE FACTOR 4); DNA binding / transcription factor (TAIR:AT4G27950.1); Has 3945 Blast hits to 3745 proteins in 205 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 3919; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink).  protein_id AT5G53290.1p  transcript_id AT5G53290.1  protein_id AT5G53290.1p  transcript_id AT5G53290.1  
LOCN Exon
COOR C/21617961-21619025

CLON GABI_381F04[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr1
EVAL e-103
COOR C/5201212-5201400

HITS At1g15110[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G15110.1 CDS  gene_syn F9L1.4, F9L1_4  go_process phosphatidylserine biosynthetic process|GO:0006659||IEA  go_component cellular_component|GO:0005575||ND  go_process phosphatidylserine biosynthetic process|GO:0006659||ISS  go_function CDP-diacylglycerol-serine O-phosphatidyltransferase activity|GO:0003882||ISS  product phosphatidyl serine synthase family protein  note phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 247 Blast hits to 246 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 4; Plants - 30; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).  protein_id AT1G15110.1p  transcript_id AT1G15110.1  protein_id AT1G15110.1p  transcript_id AT1G15110.1  
LOCN Exon
COOR W/5199594-5199754,5199841-5199906,5200005-5200064,5200178-5200268,5200382-5200436,5200523-5200602,5200688-5200804,5200908-5200992,5201081-5201172,5201254-5201507,5201593-5201681,5201781-5201908
HITS At1g15110[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G15110.2 CDS  gene_syn F9L1.4, F9L1_4  go_process phosphatidylserine biosynthetic process|GO:0006659||IEA  go_component cellular_component|GO:0005575||ND  go_process phosphatidylserine biosynthetic process|GO:0006659||ISS  go_function CDP-diacylglycerol-serine O-phosphatidyltransferase activity|GO:0003882||ISS  product phosphatidyl serine synthase family protein  note phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 247 Blast hits to 246 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 4; Plants - 30; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).  protein_id AT1G15110.2p  transcript_id AT1G15110.2  protein_id AT1G15110.2p  transcript_id AT1G15110.2  
LOCN Exon
COOR W/5199594-5199754,5199841-5199906,5200005-5200064,5200178-5200268,5200382-5200436,5200523-5200602,5200688-5200804,5200908-5200992,5201081-5201172,5201254-5201507,5201593-5201685,5201781-5201988