CLON GABI_314H10[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr4
EVAL 2e-11
COOR C/2673426-2673459

HITS At4g05180[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT4G05180.1 CDS  gene_syn C17L7.100, C17L7_100, OEC16, OXYGEN EVOLVING COMPLEX SUBUNIT 16 KDA, PHOTOSYSTEM II SUBUNIT Q, PSBQ, PSBQ-2, PSII-Q  gene PSBQ-2  function Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.  go_component chloroplast|GO:0009507|15028209|IDA  go_component chloroplast|GO:0009507|18431481|IDA  go_component chloroplast thylakoid membrane|GO:0009535|14729914|IDA  go_component chloroplast thylakoid membrane|GO:0009535|15322131|IDA  go_component chloroplast stroma|GO:0009570|18633119|IDA  go_component thylakoid|GO:0009579|11826309|IDA  go_component thylakoid|GO:0009579|14729914|IDA  go_component thylakoid|GO:0009579|18633119|IDA  go_component thylakoid lumen|GO:0031977|11719511|IDA  go_component apoplast|GO:0048046|18538804|IDA  go_function calcium ion binding|GO:0005509||IEA  go_component chloroplast thylakoid lumen|GO:0009543|11719511|IDA  go_component chloroplast thylakoid lumen|GO:0009543|11826309|IDA  go_component oxygen evolving complex|GO:0009654||ISS  go_component chloroplast photosystem II|GO:0030095||ISS  go_process peptidyl-cysteine S-nitrosylation|GO:0018119|18297659|IDA  product PSBQ-2; calcium ion binding  note PSBQ-2; FUNCTIONS IN: calcium ion binding; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) (TAIR:AT4G21280.1); Has 138 Blast hits to 138 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).  protein_id AT4G05180.1p  transcript_id AT4G05180.1  protein_id AT4G05180.1p  transcript_id AT4G05180.1  
LOCN 300-UTR5
COOR C/2672093-2672191,2672340-2672635,2672873-2673170

CLON GABI_314H10[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr3
EVAL 1e-84
COOR W/3606598-3606779

HITS At3g11450[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT3G11450.1 CDS  go_function DNA binding|GO:0003677||IEA  go_function heat shock protein binding|GO:0031072||IEA  go_component cellular_component|GO:0005575||ND  go_process protein folding|GO:0006457||ISS  product DNAJ heat shock N-terminal domain-containing protein / cell division protein-related  note DNAJ heat shock N-terminal domain-containing protein / cell division protein-related; FUNCTIONS IN: heat shock protein binding, DNA binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein / cell division protein-related (TAIR:AT5G06110.1); Has 51717 Blast hits to 34681 proteins in 2122 species: Archae - 166; Bacteria - 8879; Metazoa - 19405; Fungi - 4515; Plants - 2164; Viruses - 194; Other Eukaryotes - 16394 (source: NCBI BLink).  protein_id AT3G11450.1p  transcript_id AT3G11450.1  protein_id AT3G11450.1p  transcript_id AT3G11450.1  
LOCN Exon
COOR C/3605459-3606969,3606997-3607477