CLON GABI_270H10[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr1
EVAL e-145
COOR C/25501811-25502097

HITS At1g68030[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G68030.1 CDS  gene_syn T23K23.12, T23K23_12  go_function protein binding|GO:0005515||IEA  go_function zinc ion binding|GO:0008270||IEA  go_component cellular_component|GO:0005575||ND  go_process biological_process|GO:0008150||ND  product PHD finger protein-related  note PHD finger protein-related; FUNCTIONS IN: protein binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT1G14770.2); Has 37 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 11; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).  protein_id AT1G68030.1p  transcript_id AT1G68030.1  protein_id AT1G68030.1p  transcript_id AT1G68030.1  
LOCN 1000-Promotor
COOR C/25500378-25500896,25500975-25501082,25501156-25501349,25501421-25501544
HITS At1g68040[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G68040.1 CDS  gene_syn T23K23.11, T23K23_11  go_function methyltransferase activity|GO:0008168||IEA  go_component cellular_component|GO:0005575||ND  go_process biological_process|GO:0008150||ND  go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757||ISS  product S-adenosyl-L-methionine:carboxyl methyltransferase family protein  note S-adenosyl-L-methionine:carboxyl methyltransferase family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: methyltransferase-related (TAIR:AT5G38100.1); Has 622 Blast hits to 614 proteins in 99 species: Archae - 0; Bacteria - 52; Metazoa - 14; Fungi - 3; Plants - 442; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).  protein_id AT1G68040.1p  transcript_id AT1G68040.1  protein_id AT1G68040.1p  transcript_id AT1G68040.1  
LOCN 1000-Promotor
COOR W/25502876-25502962,25504104-25504760,25504877-25505224

CLON GABI_270H10[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr5
EVAL 8e-30
COOR C/22416910-22416978

HITS At5g55260[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT5G55260.1 CDS  gene_syn MCO15.21, MCO15_21, PPX-2, PPX2, PROTEIN PHOSPHATASE X -2, PROTEIN PHOSPHATASE X 2  gene PPX2  function Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.  go_component cellular_component|GO:0005575||ND  go_process biological_process|GO:0008150||ND  go_function protein serine/threonine phosphatase activity|GO:0004722|8292782|ISS  go_function protein serine/threonine phosphatase activity|GO:0004722||ISS  product PPX2 (PROTEIN PHOSPHATASE X 2); protein serine/threonine phosphatase  note PROTEIN PHOSPHATASE X 2 (PPX2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: PPX1 (PROTEIN PHOSPHATASE X 1); protein serine/threonine phosphatase (TAIR:AT4G26720.1); Has 5328 Blast hits to 5200 proteins in 360 species: Archae - 49; Bacteria - 167; Metazoa - 2050; Fungi - 934; Plants - 603; Viruses - 10; Other Eukaryotes - 1515 (source: NCBI BLink).  protein_id AT5G55260.1p  transcript_id AT5G55260.1  protein_id AT5G55260.1p  transcript_id AT5G55260.1  
LOCN Intron
COOR W/22416808-22416948,22417303-22417455,22417579-22417641,22417717-22417802,22417896-22417971,22418055-22418323,22418416-22418494,22418571-22418621