CLON GABI_170G07[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr5
EVAL 0.0
COOR C/15946055-15946519

HITS At5g39840[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT5G39840.1 CDS  gene_syn K13H13.20, K13H13_20  go_function nucleic acid binding|GO:0003676||IEA  go_function helicase activity|GO:0004386||IEA  go_function ATP binding|GO:0005524||IEA  go_component mitochondrion|GO:0005739||ISS  go_process biological_process|GO:0008150||ND  go_function ATP-dependent RNA helicase activity|GO:0004004||ISS  product ATP-dependent RNA helicase, mitochondrial, putative  note ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATSUV3; ATP-dependent RNA helicase (TAIR:AT4G14790.1); Has 3103 Blast hits to 3082 proteins in 433 species: Archae - 27; Bacteria - 582; Metazoa - 237; Fungi - 253; Plants - 68; Viruses - 15; Other Eukaryotes - 1921 (source: NCBI BLink).  protein_id AT5G39840.1p  transcript_id AT5G39840.1  protein_id AT5G39840.1p  transcript_id AT5G39840.1  
LOCN 300-UTR5
COOR W/15946769-15949074,15949162-15949186

CLON GABI_170G07[Seq] [GABI-Kat] [SimpleSearch] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat FST
CHRO chr1
EVAL 1e-26
COOR C/5201212-5201279

HITS At1g15110[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G15110.1 CDS  gene_syn F9L1.4, F9L1_4  go_process phosphatidylserine biosynthetic process|GO:0006659||IEA  go_component cellular_component|GO:0005575||ND  go_process phosphatidylserine biosynthetic process|GO:0006659||ISS  go_function CDP-diacylglycerol-serine O-phosphatidyltransferase activity|GO:0003882||ISS  product phosphatidyl serine synthase family protein  note phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 247 Blast hits to 246 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 4; Plants - 30; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).  protein_id AT1G15110.1p  transcript_id AT1G15110.1  protein_id AT1G15110.1p  transcript_id AT1G15110.1  
LOCN Exon
COOR W/5199594-5199754,5199841-5199906,5200005-5200064,5200178-5200268,5200382-5200436,5200523-5200602,5200688-5200804,5200908-5200992,5201081-5201172,5201254-5201507,5201593-5201681,5201781-5201908
HITS At1g15110[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT1G15110.2 CDS  gene_syn F9L1.4, F9L1_4  go_process phosphatidylserine biosynthetic process|GO:0006659||IEA  go_component cellular_component|GO:0005575||ND  go_process phosphatidylserine biosynthetic process|GO:0006659||ISS  go_function CDP-diacylglycerol-serine O-phosphatidyltransferase activity|GO:0003882||ISS  product phosphatidyl serine synthase family protein  note phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 247 Blast hits to 246 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 4; Plants - 30; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).  protein_id AT1G15110.2p  transcript_id AT1G15110.2  protein_id AT1G15110.2p  transcript_id AT1G15110.2  
LOCN Exon
COOR W/5199594-5199754,5199841-5199906,5200005-5200064,5200178-5200268,5200382-5200436,5200523-5200602,5200688-5200804,5200908-5200992,5201081-5201172,5201254-5201507,5201593-5201685,5201781-5201988