CLON GABI_025F01 GABI-Kat T-DNA Homozygous Knockout Line for IntergenetiC by Salk  [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat HM
CHRO chr4
EVAL e-123
COOR C/15931259-15931480
NOTE IntergenetiC

HITS At4g33010[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT4G33010.1 CDS  gene_syn Arabidopsis thaliana glycine decarboxylase P-protein 1, AtGLDP1, F4I10.7  gene AtGLDP1  go_component mitochondrion|GO:0005739|18385124|IDA  go_component chloroplast|GO:0009507|18431481|IDA  go_component chloroplast envelope|GO:0009941|12938931|IDA  go_component apoplast|GO:0048046|18538804|IDA  go_function catalytic activity|GO:0003824||IEA  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||IEA  go_function pyridoxal phosphate binding|GO:0030170||IEA  go_component mitochondrion|GO:0005739|14671022|IDA  go_component glycine cleavage complex|GO:0005960||ISS  go_process glycine catabolic process|GO:0006546|17496108|IMP  go_process glycine decarboxylation via glycine cleavage system|GO:0019464||ISS  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||ISS  product AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1); catalytic/ glycine dehydrogenase (decarboxylating)/ pyridoxal phosphate binding  note Arabidopsis thaliana glycine decarboxylase P-protein 1 (AtGLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2); ATP binding / glycine dehydrogenase (decarboxylating) (TAIR:AT2G26080.1); Has 9787 Blast hits to 8954 proteins in 1113 species: Archae - 131; Bacteria - 2880; Metazoa - 122; Fungi - 158; Plants - 73; Viruses - 0; Other Eukaryotes - 6423 (source: NCBI BLink).  protein_id AT4G33010.1p  transcript_id AT4G33010.1  protein_id AT4G33010.1p  transcript_id AT4G33010.1  
LOCN 1000-Promotor
COOR C/15926852-15926940,15927043-15927160,15927258-15927356,15927444-15927569,15927651-15927728,15927815-15928003,15928095-15928247,15928328-15928627,15928726-15928851,15928932-15929127,15929218-15929318,15929405-15929482,15929571-15929816,15929936-15931150
HITS At4g33010[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT4G33010.2 CDS  gene_syn Arabidopsis thaliana glycine decarboxylase P-protein 1, AtGLDP1, F4I10.7  gene AtGLDP1  go_component mitochondrion|GO:0005739|18385124|IDA  go_component chloroplast|GO:0009507|18431481|IDA  go_component apoplast|GO:0048046|18538804|IDA  go_function catalytic activity|GO:0003824||IEA  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||IEA  go_function pyridoxal phosphate binding|GO:0030170||IEA  go_component mitochondrion|GO:0005739|14671022|IDA  go_component glycine cleavage complex|GO:0005960||ISS  go_process glycine catabolic process|GO:0006546|17496108|IMP  go_process glycine decarboxylation via glycine cleavage system|GO:0019464||ISS  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||ISS  product AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1); catalytic/ glycine dehydrogenase (decarboxylating)/ pyridoxal phosphate binding  note Arabidopsis thaliana glycine decarboxylase P-protein 1 (AtGLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2); ATP binding / glycine dehydrogenase (decarboxylating) (TAIR:AT2G26080.1); Has 9622 Blast hits to 8824 proteins in 1115 species: Archae - 131; Bacteria - 2860; Metazoa - 121; Fungi - 162; Plants - 77; Viruses - 0; Other Eukaryotes - 6271 (source: NCBI BLink).  protein_id AT4G33010.2p  transcript_id AT4G33010.2  protein_id AT4G33010.2p  transcript_id AT4G33010.2  
LOCN 1000-Promotor
COOR C/15927133-15927156,15927258-15927356,15927444-15927569,15927651-15927728,15927815-15928003,15928095-15928247,15928328-15928627,15928726-15928851,15928932-15929127,15929218-15929318,15929405-15929482,15929571-15929816,15929936-15931150

CLON GABI_025F01[Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat Confirmed
CHRO chr4
EVAL e-123
COOR C/15931259-15931480
NOTE f4i10

HITS At4g33010[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT4G33010.1 CDS  gene_syn Arabidopsis thaliana glycine decarboxylase P-protein 1, AtGLDP1, F4I10.7  gene AtGLDP1  go_component mitochondrion|GO:0005739|18385124|IDA  go_component chloroplast|GO:0009507|18431481|IDA  go_component chloroplast envelope|GO:0009941|12938931|IDA  go_component apoplast|GO:0048046|18538804|IDA  go_function catalytic activity|GO:0003824||IEA  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||IEA  go_function pyridoxal phosphate binding|GO:0030170||IEA  go_component mitochondrion|GO:0005739|14671022|IDA  go_component glycine cleavage complex|GO:0005960||ISS  go_process glycine catabolic process|GO:0006546|17496108|IMP  go_process glycine decarboxylation via glycine cleavage system|GO:0019464||ISS  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||ISS  product AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1); catalytic/ glycine dehydrogenase (decarboxylating)/ pyridoxal phosphate binding  note Arabidopsis thaliana glycine decarboxylase P-protein 1 (AtGLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2); ATP binding / glycine dehydrogenase (decarboxylating) (TAIR:AT2G26080.1); Has 9787 Blast hits to 8954 proteins in 1113 species: Archae - 131; Bacteria - 2880; Metazoa - 122; Fungi - 158; Plants - 73; Viruses - 0; Other Eukaryotes - 6423 (source: NCBI BLink).  protein_id AT4G33010.1p  transcript_id AT4G33010.1  protein_id AT4G33010.1p  transcript_id AT4G33010.1  
LOCN 1000-Promotor
COOR C/15926852-15926940,15927043-15927160,15927258-15927356,15927444-15927569,15927651-15927728,15927815-15928003,15928095-15928247,15928328-15928627,15928726-15928851,15928932-15929127,15929218-15929318,15929405-15929482,15929571-15929816,15929936-15931150
HITS At4g33010[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
       [Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern] 
       [YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap] 
       [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] 
TYPE Gene
TITL AT4G33010.2 CDS  gene_syn Arabidopsis thaliana glycine decarboxylase P-protein 1, AtGLDP1, F4I10.7  gene AtGLDP1  go_component mitochondrion|GO:0005739|18385124|IDA  go_component chloroplast|GO:0009507|18431481|IDA  go_component apoplast|GO:0048046|18538804|IDA  go_function catalytic activity|GO:0003824||IEA  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||IEA  go_function pyridoxal phosphate binding|GO:0030170||IEA  go_component mitochondrion|GO:0005739|14671022|IDA  go_component glycine cleavage complex|GO:0005960||ISS  go_process glycine catabolic process|GO:0006546|17496108|IMP  go_process glycine decarboxylation via glycine cleavage system|GO:0019464||ISS  go_function glycine dehydrogenase (decarboxylating) activity|GO:0004375||ISS  product AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1); catalytic/ glycine dehydrogenase (decarboxylating)/ pyridoxal phosphate binding  note Arabidopsis thaliana glycine decarboxylase P-protein 1 (AtGLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2); ATP binding / glycine dehydrogenase (decarboxylating) (TAIR:AT2G26080.1); Has 9622 Blast hits to 8824 proteins in 1115 species: Archae - 131; Bacteria - 2860; Metazoa - 121; Fungi - 162; Plants - 77; Viruses - 0; Other Eukaryotes - 6271 (source: NCBI BLink).  protein_id AT4G33010.2p  transcript_id AT4G33010.2  protein_id AT4G33010.2p  transcript_id AT4G33010.2  
LOCN 1000-Promotor
COOR C/15927133-15927156,15927258-15927356,15927444-15927569,15927651-15927728,15927815-15928003,15928095-15928247,15928328-15928627,15928726-15928851,15928932-15929127,15929218-15929318,15929405-15929482,15929571-15929816,15929936-15931150

CLON GABI_025F01 GABI-Kat T-DNA Homozygous Knockout Line for IntergenetiC by Salk  [Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat HM
CHRO chr2
EVAL 6e-06
COOR C/5919154-5919182
NOTE IntergenetiC


CLON GABI_025F01[Seq] [GABI-Kat] [SimpleSearch] [Confirmation] [pAC106] [pAC161] [pGABI1] [pADIS1] [Order from GABI-Kat] [Order from NASC] 
TYPE GABI-Kat Confirmed
CHRO chr2
EVAL 6e-06
COOR C/5919154-5919182
NOTE f4i10