CLON CSHL_ET11123[Seq] [CSHL Ds] [Detail] [Order] 
TYPE CSHL FST
CHRO chr1
EVAL 1e-79
COOR C/18375952-18376337

HITS AT1G49640.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G49640.1 CDS ID=AT1G49640.1; Parent=AT1G49640; Name=AT1G49640.1; Note=alpha/beta-Hydrolases superfamily protein; conf_class=1; computational_description=alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G49650.1)%3B Has 9471 Blast hits to 9453 proteins in 1524 species: Archae - 114%3B Bacteria - 5581%3B Metazoa - 494%3B Fungi - 821%3B Plants - 1350%3B Viruses - 5%3B Other Eukaryotes - 1106 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:14738307, PMID:20032078, PMID:20736450, locus:2012196; locus_type=protein_coding LOCN Exon COOR C/18375697-18376644 CLON CSHL_ET11123[Seq] [CSHL Ds] [Detail] [Order] TYPE CSHL FST CHRO chr1 EVAL 0.0 COOR W/18376333-18376946 HITS AT1G49630.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G49630.1 CDS ID=AT1G49630.1; Parent=AT1G49630; Name=AT1G49630.1; Note=presequence protease 2; curator_summary=Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower%2C leaf and root. Not expressed in silique and shoot.; conf_class=1; symbol=PREP2; Alias=ATPREP2, presequence protease 2; full_name=presequence protease 2; computational_description=presequence protease 2 (PREP2)%3B FUNCTIONS IN: metallopeptidase activity%2C metalloendopeptidase activity%2C zinc ion binding%2C catalytic activity%2C metal ion binding%3B INVOLVED IN: proteolysis%2C protein maturation by peptide bond cleavage%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M16%2C C-terminal (InterPro:IPR007863)%2C Peptidase M16C associated (InterPro:IPR013578)%2C Peptidase M16%2C N-terminal (InterPro:IPR011765)%2C Metalloenzyme%2C LuxS/M16 peptidase-like%2C metal-binding (InterPro:IPR011249)%2C Peptidase M16%2C core (InterPro:IPR011237)%3B BEST Arabidopsis thaliana protein match is: presequence protease 1 (TAIR:AT3G19170.1)%3B Has 3964 Blast hits to 3937 proteins in 1352 species: Archae - 7%3B Bacteria - 2621%3B Metazoa - 205%3B Fungi - 264%3B Plants - 79%3B Viruses - 0%3B Other Eukaryotes - 788 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:12138166, PMID:11826309, PMID:14576160, PMID:16766689, PMID:18230142, PMID:19701724, PMID:21995547, locus:2012176; locus_type=protein_coding LOCN 1000-Promotor COOR C/18368405-18368549,18368808-18368879,18368976-18369156,18369258-18369420,18369526-18369790,18369950-18370047,18370127-18370210,18370794-18370983,18371656-18371783,18371862-18372080,18372154-18372318,18372399-18372919,18373036-18373126,18373258-18373341,18373713-18373783,18373902-18374034,18374123-18374297,18374592-18374760,18375048-18375336 HITS AT1G49630.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G49630.2 CDS ID=AT1G49630.2; Parent=AT1G49630; Name=AT1G49630.2; Note=presequence protease 2; curator_summary=Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower%2C leaf and root. Not expressed in silique and shoot.; conf_class=2; symbol=PREP2; Alias=ATPREP2, presequence protease 2; full_name=presequence protease 2; computational_description=presequence protease 2 (PREP2)%3B FUNCTIONS IN: metallopeptidase activity%2C metalloendopeptidase activity%2C zinc ion binding%2C catalytic activity%2C metal ion binding%3B INVOLVED IN: proteolysis%2C protein maturation by peptide bond cleavage%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M16%2C C-terminal (InterPro:IPR007863)%2C Peptidase M16C associated (InterPro:IPR013578)%2C Peptidase M16%2C N-terminal (InterPro:IPR011765)%2C Metalloenzyme%2C LuxS/M16 peptidase-like%2C metal-binding (InterPro:IPR011249)%2C Peptidase M16%2C core (InterPro:IPR011237)%3B BEST Arabidopsis thaliana protein match is: presequence protease 1 (TAIR:AT3G19170.1)%3B Has 3964 Blast hits to 3937 proteins in 1352 species: Archae - 7%3B Bacteria - 2621%3B Metazoa - 205%3B Fungi - 264%3B Plants - 79%3B Viruses - 0%3B Other Eukaryotes - 788 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:12138166, PMID:11826309, PMID:14576160, PMID:16766689, PMID:18230142, PMID:19701724, PMID:21995547, locus:2012176; locus_type=protein_coding LOCN 1000-Promotor COOR C/18368405-18368549,18368808-18368879,18368976-18369156,18369258-18369420,18369526-18369790,18369950-18370047,18370127-18370210,18370794-18370983,18371656-18371783,18371862-18372080,18372154-18372318,18372399-18372919,18373036-18373126,18373258-18373341,18373713-18373783,18373902-18374034,18374123-18374297,18374592-18374760,18375048-18375336 HITS AT1G49630.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G49630.3 CDS ID=AT1G49630.3; Parent=AT1G49630; Name=AT1G49630.3; Note=presequence protease 2; curator_summary=Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower%2C leaf and root. Not expressed in silique and shoot.; conf_class=2; symbol=PREP2; Alias=ATPREP2, presequence protease 2; full_name=presequence protease 2; computational_description=presequence protease 2 (PREP2)%3B FUNCTIONS IN: metallopeptidase activity%2C metalloendopeptidase activity%2C zinc ion binding%2C catalytic activity%2C metal ion binding%3B INVOLVED IN: proteolysis%2C protein maturation by peptide bond cleavage%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M16%2C C-terminal (InterPro:IPR007863)%2C Peptidase M16C associated (InterPro:IPR013578)%2C Peptidase M16%2C N-terminal (InterPro:IPR011765)%2C Metalloenzyme%2C LuxS/M16 peptidase-like%2C metal-binding (InterPro:IPR011249)%2C Peptidase M16%2C core (InterPro:IPR011237)%3B BEST Arabidopsis thaliana protein match is: presequence protease 1 (TAIR:AT3G19170.1)%3B Has 3964 Blast hits to 3937 proteins in 1352 species: Archae - 7%3B Bacteria - 2621%3B Metazoa - 205%3B Fungi - 264%3B Plants - 79%3B Viruses - 0%3B Other Eukaryotes - 788 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:12138166, PMID:11826309, PMID:14576160, PMID:16766689, PMID:18230142, PMID:19701724, PMID:21995547, locus:2012176; locus_type=protein_coding LOCN 1000-Promotor COOR C/18368405-18368549,18368808-18368879,18368976-18369156,18369258-18369420,18369526-18369790,18369950-18370047,18370127-18370210,18370794-18370983,18371656-18371783,18371862-18372080,18372154-18372318,18372399-18372919,18373036-18373126,18373258-18373341,18373713-18373783,18373902-18374034,18374123-18374297,18374592-18374760,18375048-18375336 HITS AT1G49640.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G49640.1 CDS ID=AT1G49640.1; Parent=AT1G49640; Name=AT1G49640.1; Note=alpha/beta-Hydrolases superfamily protein; conf_class=1; computational_description=alpha/beta-Hydrolases superfamily protein%3B FUNCTIONS IN: hydrolase activity%3B INVOLVED IN: metabolic process%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094)%3B BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G49650.1)%3B Has 9471 Blast hits to 9453 proteins in 1524 species: Archae - 114%3B Bacteria - 5581%3B Metazoa - 494%3B Fungi - 821%3B Plants - 1350%3B Viruses - 5%3B Other Eukaryotes - 1106 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:14738307, PMID:20032078, PMID:20736450, locus:2012196; locus_type=protein_coding LOCN Exon COOR C/18375697-18376644