CLON BP823572[GenBank] 
TYPE ESTs
CHRO chr4
EVAL 2e-96
COOR C/13043729-13043828,13043920-13043991,13044081-13044287

HITS AT4G25540.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G25540.1 CDS ID=AT4G25540.1; Parent=AT4G25540; Name=AT4G25540.1; Note=homolog of DNA mismatch repair protein MSH3; curator_summary=encodes a DNA mismatch repair homolog of human MutS gene%2C MSH6. There are four MutS genes in Arabidopsis%2C MSH2%2C MSH3%2C MSH6%2C and MSH7%2C which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).; conf_class=1; symbol=MSH3; Alias=ATMSH3; full_name=homolog of DNA mismatch repair protein MSH3; computational_description=homolog of DNA mismatch repair protein MSH3 (MSH3)%3B CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS%2C clamp (InterPro:IPR007861)%2C DNA mismatch repair protein MutS%2C connector (InterPro:IPR007860)%2C DNA mismatch repair protein MutS%2C N-terminal (InterPro:IPR016151)%2C DNA mismatch repair protein MutS%2C core (InterPro:IPR007696)%2C DNA mismatch repair protein MutS%2C C-terminal (InterPro:IPR000432)%2C DNA mismatch repair protein MutS-like%2C N-terminal (InterPro:IPR007695)%3B BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2)%3B Has 14547 Blast hits to 13713 proteins in 2703 species: Archae - 153%3B Bacteria - 9793%3B Metazoa - 705%3B Fungi - 864%3B Plants - 451%3B Viruses - 3%3B Other Eukaryotes - 2578 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:10852942, PMID:10517319, PMID:11130711, PMID:14576160, PMID:15053760, PMID:16126853, PMID:17014743, PMID:18775970, PMID:24652625, locus:2131829; locus_type=protein_coding LOCN Exon COOR C/13042700-13042969,13043133-13043594,13043679-13043828,13043921-13043992,13044082-13044342,13044680-13044811,13044972-13045226,13045722-13045973,13046216-13046314,13046403-13046567,13046731-13046922,13047180-13048115