CLON ATTCCATGATCTGTGAG[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr4
EVAL 100.00
COOR C/13369580-13369596
NOTE 1, +0 3 0 0 0

HITS AT4G26466.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26466.1 CDS ID=AT4G26466.1; Parent=AT4G26466; Name=AT4G26466.1; Note=lorelei; curator_summary=Encodes a membrane localized (putative GPI-anchored) protein involved in fertilization. Loss of function mutations display defects in fertilization-around 25%25 of embryo sacs abort.; conf_class=1; symbol=LRE; full_name=LORELEI; computational_description=LORELEI (LRE)%3B BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (TAIR:AT5G56170.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:19028964, PMID:20163554, PMID:21051955, PMID:21826430, locus:4515103457; locus_type=protein_coding LOCN 1000-Promotor COOR C/13367645-13368009,13368423-13368482,13368557-13368629 HITS AT4G26460.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26460.2 CDS ID=AT4G26460.2; Parent=AT4G26460; Name=AT4G26460.2; Note=S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; computational_description=S-adenosyl-L-methionine-dependent methyltransferases superfamily protein%3B FUNCTIONS IN: methyltransferase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%3B CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299)%3B BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26420.2)%3B Has 118 Blast hits to 117 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 118%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).; Dbxref=PMID:19028964, locus:2131443; locus_type=protein_coding LOCN Exon COOR W/13369530-13369784,13369859-13370011 HITS AT4G26460.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26460.1 CDS ID=AT4G26460.1; Parent=AT4G26460; Name=AT4G26460.1; Note=S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; conf_class=1; computational_description=S-adenosyl-L-methionine-dependent methyltransferases superfamily protein%3B FUNCTIONS IN: methyltransferase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%3B CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299)%3B BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26420.2)%3B Has 118 Blast hits to 117 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 118%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:19028964, locus:2131443; locus_type=protein_coding LOCN Exon COOR W/13369590-13369784,13369859-13370011 HITS AT4TE62850[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4TE62850 transposable_element ID=AT4TE62850; Name=AT4TE62850; Alias=ATREP10D LOCN 1000-Promotor COOR W/13370015-13370874