CLON AGAGTGTTTGTTGAATC[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr5
EVAL 100.00
COOR C/15920245-15920261
NOTE 1, +0 6 0 0 0

HITS AT5G39770.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5G39770.1 CDS ID=AT5G39770.1; Parent=AT5G39770; Name=AT5G39770.1; Note=Restriction endonuclease%2C type II-like superfamily protein; curator_summary=Represents a non-function pseudogene homologous to AtMSU81 (At4g30870).; conf_class=7; computational_description=Restriction endonuclease%2C type II-like superfamily protein%3B FUNCTIONS IN: DNA binding%2C endonuclease activity%2C nucleic acid binding%2C nuclease activity%3B INVOLVED IN: DNA repair%2C DNA metabolic process%3B CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166)%2C Restriction endonuclease%2C type II-like (InterPro:IPR011335)%3B BEST Arabidopsis thaliana protein match is: Restriction endonuclease%2C type II-like superfamily protein (TAIR:AT4G30870.1)%3B Has 484 Blast hits to 435 proteins in 184 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 125%3B Fungi - 136%3B Plants - 59%3B Viruses - 0%3B Other Eukaryotes - 156 (source: NCBI BLink).; conf_rating=**; Dbxref=PMID:16945961, PMID:17208327, PMID:18822296, locus:2167057; locus_type=protein_coding LOCN Intron COOR C/15919241-15919384,15919467-15919818,15919912-15919991,15920081-15920198,15920451-15920581,15920683-15920798,15920879-15920941,15920996-15921036,15921129-15921251,15921345-15921429,15921513-15921593,15921682-15921776,15922223-15922364,15922594-15922752,15922858-15922908,15922994-15923258,15923401-15923598,15923738-15923830,15923955-15924034,15924217-15924442,15924831-15924961,15925051-15925131,15925366-15925448,15925546-15925592,15925728-15925856,15925944-15926066,15926199-15926312,15926442-15926483,15926597-15926641,15926727-15926763,15927125-15927361,15927443-15927549 CLON AGAGTGTTTGTTGAATC[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr4 EVAL 100.00 COOR C/13264638-13264654 NOTE 1, +0 6 0 0 0 HITS AT4G26190.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26190.1 CDS ID=AT4G26190.1; Parent=AT4G26190; Name=AT4G26190.1; Note=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; conf_class=2; computational_description=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1)%3B Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84%3B Bacteria - 2677%3B Metazoa - 10403%3B Fungi - 2363%3B Plants - 1406%3B Viruses - 96%3B Other Eukaryotes - 10541 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:18156295, PMID:19028964, locus:2120883; locus_type=protein_coding LOCN Exon COOR C/13262473-13262627,13262709-13262769,13262864-13263049,13263300-13263363,13263489-13263570,13263657-13266282 HITS AT4G26190.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26190.2 CDS ID=AT4G26190.2; Parent=AT4G26190; Name=AT4G26190.2; Note=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Dbxref=PMID:18156295, PMID:19028964, locus:2120883; computational_description=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1)%3B Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84%3B Bacteria - 2677%3B Metazoa - 10403%3B Fungi - 2363%3B Plants - 1406%3B Viruses - 96%3B Other Eukaryotes - 10541 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/13262473-13262627,13262709-13262769,13262864-13263049,13263300-13263363,13263489-13263570,13263657-13266282 HITS AT4G26190.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26190.3 CDS ID=AT4G26190.3; Parent=AT4G26190; Name=AT4G26190.3; Note=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Dbxref=PMID:18156295, PMID:19028964, locus:2120883; computational_description=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1)%3B Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84%3B Bacteria - 2677%3B Metazoa - 10403%3B Fungi - 2363%3B Plants - 1406%3B Viruses - 96%3B Other Eukaryotes - 10541 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/13262473-13262627,13262709-13262769,13262864-13263049,13263300-13263363,13263489-13263570,13263657-13266282 HITS AT4G26190.4[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26190.4 CDS ID=AT4G26190.4; Parent=AT4G26190; Name=AT4G26190.4; Note=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Dbxref=PMID:18156295, PMID:19028964, locus:2120883; computational_description=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1)%3B Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84%3B Bacteria - 2677%3B Metazoa - 10403%3B Fungi - 2363%3B Plants - 1406%3B Viruses - 96%3B Other Eukaryotes - 10541 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/13262473-13262627,13262709-13262769,13262864-13263049,13263300-13263363,13263489-13263570,13263657-13266282 HITS AT4G26190.5[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26190.5 CDS ID=AT4G26190.5; Parent=AT4G26190; Name=AT4G26190.5; Note=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Dbxref=PMID:18156295, PMID:19028964, locus:2120883; computational_description=Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1)%3B Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84%3B Bacteria - 2677%3B Metazoa - 10403%3B Fungi - 2363%3B Plants - 1406%3B Viruses - 96%3B Other Eukaryotes - 10541 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/13262473-13262627,13262709-13262769,13262864-13263049,13263300-13263363,13263489-13263570,13263657-13266282