CLON CATGCCAAGAAAAG[About SAGE] 
TYPE SAGE Target
CHRO chr3
EVAL 100
COOR C/2881163-2881176

HITS AT3G09370.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G09370.1 CDS ID=AT3G09370.1; Parent=AT3G09370; Name=AT3G09370.1; Note=myb domain protein 3r-3; curator_summary=putative c-myb-like transcription factor (MYB3R3) mRNA%2C; conf_class=2; symbol=MYB3R-3; Alias=AtMYB3R3, myb domain protein 3R3; full_name=myb domain protein 3r-3; computational_description=myb domain protein 3r-3 (MYB3R-3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C regulation of transcription%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 3r-5 (TAIR:AT5G02320.2)%3B Has 12681 Blast hits to 8608 proteins in 562 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1169%3B Fungi - 1136%3B Plants - 7404%3B Viruses - 4%3B Other Eukaryotes - 2968 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11118137, PMID:11597504, PMID:16463103, PMID:17287251, PMID:24377444, locus:2083599; locus_type=protein_coding LOCN Intron COOR W/2879534-2879575,2879899-2880059,2880172-2880223,2880321-2880378,2880667-2880761,2880845-2880948,2881025-2881153,2881252-2882128 HITS AT3G09370.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G09370.2 CDS ID=AT3G09370.2; Parent=AT3G09370; Name=AT3G09370.2; Note=myb domain protein 3r-3; curator_summary=putative c-myb-like transcription factor (MYB3R3) mRNA%2C; conf_class=3; symbol=MYB3R-3; Alias=AtMYB3R3, myb domain protein 3R3; full_name=myb domain protein 3r-3; computational_description=myb domain protein 3r-3 (MYB3R-3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C regulation of transcription%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 3r-5 (TAIR:AT5G02320.2)%3B Has 12681 Blast hits to 8608 proteins in 562 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1169%3B Fungi - 1136%3B Plants - 7404%3B Viruses - 4%3B Other Eukaryotes - 2968 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11118137, PMID:11597504, PMID:16463103, PMID:17287251, PMID:24377444, locus:2083599; locus_type=protein_coding LOCN Intron COOR W/2879534-2879575,2879884-2880059,2880172-2880223,2880321-2880378,2880667-2880761,2880845-2880948,2881025-2881153,2881252-2882128 HITS AT3G09370.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G09370.3 CDS ID=AT3G09370.3; Parent=AT3G09370; Name=AT3G09370.3; Note=myb domain protein 3r-3; symbol=MYB3R-3; Alias=AtMYB3R3, myb domain protein 3R3; full_name=myb domain protein 3r-3; curator_summary=putative c-myb-like transcription factor (MYB3R3) mRNA%2C; computational_description=myb domain protein 3r-3 (MYB3R-3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C regulation of transcription%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 3r-5 (TAIR:AT5G02320.2)%3B Has 12681 Blast hits to 8608 proteins in 562 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1169%3B Fungi - 1136%3B Plants - 7404%3B Viruses - 4%3B Other Eukaryotes - 2968 (source: NCBI BLink).; Dbxref=PMID:11118137, PMID:11597504, PMID:16463103, PMID:17287251, PMID:24377444, locus:2083599; locus_type=protein_coding LOCN Intron COOR W/2879818-2880059,2880172-2880223,2880321-2880378,2880667-2880761,2880845-2880948,2881025-2881153,2881252-2882128 CLON CATGCCAAGAAAAG[About SAGE] TYPE SAGE Target CHRO chr4 EVAL 100 COOR C/5831587-5831600 HITS AT4G09150.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G09150.1 CDS ID=AT4G09150.1; Parent=AT4G09150; Name=AT4G09150.1; Note=T-complex protein 11; conf_class=2; computational_description=T-complex protein 11%3B FUNCTIONS IN: phosphopantetheine binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862)%2C Phosphopantetheine attachment site (InterPro:IPR006162)%3B BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT1G22930.1)%3B Has 14735 Blast hits to 9884 proteins in 1062 species: Archae - 66%3B Bacteria - 2337%3B Metazoa - 6091%3B Fungi - 1162%3B Plants - 694%3B Viruses - 23%3B Other Eukaryotes - 4362 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:18775970, locus:2122393; locus_type=protein_coding LOCN Intron COOR W/5828753-5828938,5829009-5829127,5829206-5829650,5829737-5829852,5829933-5830671,5830822-5830966,5831047-5831204,5831329-5831517,5831607-5831834,5832183-5832507,5832735-5832918,5833016-5833475 HITS AT4G09150.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G09150.2 CDS ID=AT4G09150.2; Parent=AT4G09150; Name=AT4G09150.2; Note=T-complex protein 11; conf_class=2; computational_description=T-complex protein 11%3B FUNCTIONS IN: phosphopantetheine binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862)%2C Phosphopantetheine attachment site (InterPro:IPR006162)%3B BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT1G22930.1)%3B Has 14735 Blast hits to 9884 proteins in 1062 species: Archae - 66%3B Bacteria - 2337%3B Metazoa - 6091%3B Fungi - 1162%3B Plants - 694%3B Viruses - 23%3B Other Eukaryotes - 4362 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:18775970, locus:2122393; locus_type=protein_coding LOCN Intron COOR W/5828753-5828938,5829009-5829127,5829206-5829650,5829737-5829852,5829933-5830671,5830822-5830966,5831044-5831204,5831329-5831517,5831607-5831834,5832183-5832507,5832735-5832918,5833016-5833475 CLON CATGCCAAGAAAAG[About SAGE] TYPE SAGE Target CHRO chr4 EVAL 100 COOR C/13368422-13368435 HITS AT4G26466.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26466.1 CDS ID=AT4G26466.1; Parent=AT4G26466; Name=AT4G26466.1; Note=lorelei; curator_summary=Encodes a membrane localized (putative GPI-anchored) protein involved in fertilization. Loss of function mutations display defects in fertilization-around 25%25 of embryo sacs abort.; conf_class=1; symbol=LRE; full_name=LORELEI; computational_description=LORELEI (LRE)%3B BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (TAIR:AT5G56170.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:19028964, PMID:20163554, PMID:21051955, PMID:21826430, locus:4515103457; locus_type=protein_coding LOCN Exon COOR C/13367645-13368009,13368423-13368482,13368557-13368629