CLON GATCGATAAGGAAGAGT[About MPSS mRNA] 
TYPE MPSS mRNA Target
CHRO chr5
EVAL 100.00
COOR W/22673310-22673326
NOTE 79 111 95 108 66 25 56 56 39 159 75 22 24 96 110 44 136

HITS AT5G55990.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5G55990.1 CDS ID=AT5G55990.1; Parent=AT5G55990; Name=AT5G55990.1; Note=calcineurin B-like protein 2; curator_summary=Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family.; conf_class=2; symbol=CBL2; Alias=ATCBL2, SCaBP1, SOS3-LIKE CALCIUM BINDING PROTEIN 1; full_name=calcineurin B-like protein 2; computational_description=calcineurin B-like protein 2 (CBL2)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: calcium-mediated signaling%3B LOCATED IN: cytosolic ribosome%2C plant-type vacuole membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcineurin B protein (InterPro:IPR015757)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%3B BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:10590166, PMID:10200328, PMID:11230129, PMID:11115898, PMID:11577192, PMID:14557048, PMID:16814720, PMID:18502848, PMID:18775970, PMID:18237745, PMID:19686372, PMID:19704598, PMID:21333657, PMID:22547024, PMID:23109687, PMID:23184060, PMID:23482856, PMID:24521877, PMID:24479654, PMID:25646412, locus:2161760; locus_type=protein_coding LOCN Exon COOR W/22672189-22672312,22672449-22672531,22672630-22672689,22672786-22672894,22672970-22673022,22673117-22673197,22673275-22673387,22673522-22673579 HITS AT5G55990.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5G55990.2 CDS ID=AT5G55990.2; Parent=AT5G55990; Name=AT5G55990.2; Note=calcineurin B-like protein 2; symbol=CBL2; Alias=ATCBL2, SCaBP1, SOS3-LIKE CALCIUM BINDING PROTEIN 1; full_name=calcineurin B-like protein 2; Dbxref=PMID:10590166, PMID:10200328, PMID:11230129, PMID:11115898, PMID:11577192, PMID:14557048, PMID:16814720, PMID:18502848, PMID:18775970, PMID:18237745, PMID:19686372, PMID:19704598, PMID:21333657, PMID:22547024, PMID:23109687, PMID:23184060, PMID:23482856, PMID:24521877, PMID:24479654, PMID:25646412, locus:2161760; curator_summary=Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family.; computational_description=calcineurin B-like protein 2 (CBL2)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: calcium-mediated signaling%3B LOCATED IN: cytosolic ribosome%2C plant-type vacuole membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcineurin B protein (InterPro:IPR015757)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%3B BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR W/22672189-22672312,22672449-22672531,22672630-22672689,22672786-22672894,22672970-22673022,22673117-22673197,22673275-22673387,22673522-22673579 CLON GATCGATAAGGAAGAGT[About MPSS mRNA] TYPE MPSS mRNA Target CHRO chr4 EVAL 100.00 COOR C/13408824-13408840 NOTE 79 111 95 108 66 25 56 56 39 159 75 22 24 96 110 44 136 HITS AT4G26560.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26560.1 CDS ID=AT4G26560.1; Parent=AT4G26560; Name=AT4G26560.1; Note=calcineurin B-like protein 7; curator_summary=Encodes calcineurin B-like protein 7 (CBL7).; conf_class=1; symbol=CBL7; full_name=calcineurin B-like protein 7; computational_description=calcineurin B-like protein 7 (CBL7)%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C Recoverin (InterPro:IPR001125)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcineurin B protein (InterPro:IPR015757)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%3B BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:11230129, PMID:12372144, PMID:12045290, PMID:14557048, PMID:14730064, locus:2133857; locus_type=protein_coding LOCN 1000-Promotor COOR C/13406733-13406790,13406894-13407006,13407121-13407254,13407378-13407486,13407562-13407621,13407733-13407780,13407851-13407973 HITS AT4G26570.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26570.1 CDS ID=AT4G26570.1; Parent=AT4G26570; Name=AT4G26570.1; Note=calcineurin B-like 3; curator_summary=member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); conf_class=2; symbol=CBL3; Alias=ATCBL3, calcineurin B-like 3; full_name=calcineurin B-like 3; computational_description=calcineurin B-like 3 (CBL3)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: detection of calcium ion%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Calcineurin B protein (InterPro:IPR015757)%2C Recoverin (InterPro:IPR001125)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:10590166, PMID:10200328, PMID:11230129, PMID:11115898, PMID:14557048, PMID:16478466, PMID:16814720, PMID:18775970, PMID:18945934, PMID:19686372, PMID:23109687, PMID:23184060, PMID:23482856, PMID:23713076, PMID:24479654, PMID:25646412, locus:2133867; locus_type=protein_coding LOCN Exon COOR C/13408608-13408665,13408763-13408875,13408993-13409126,13409247-13409355,13409442-13409501,13409627-13409709,13409875-13409998 HITS AT4G26570.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26570.2 CDS ID=AT4G26570.2; Parent=AT4G26570; Name=AT4G26570.2; Note=calcineurin B-like 3; curator_summary=member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); conf_class=2; symbol=CBL3; Alias=ATCBL3, calcineurin B-like 3; full_name=calcineurin B-like 3; computational_description=calcineurin B-like 3 (CBL3)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: detection of calcium ion%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Calcineurin B protein (InterPro:IPR015757)%2C Recoverin (InterPro:IPR001125)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:10590166, PMID:10200328, PMID:11230129, PMID:11115898, PMID:14557048, PMID:16478466, PMID:16814720, PMID:18775970, PMID:18945934, PMID:19686372, PMID:23109687, PMID:23184060, PMID:23482856, PMID:23713076, PMID:24479654, PMID:25646412, locus:2133867; locus_type=protein_coding LOCN Exon COOR C/13408608-13408665,13408763-13408875,13408993-13409126,13409247-13409367,13409442-13409501,13409627-13409709,13409875-13409998