CODE AT4G26260.1 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene CHRO chr4 TITL AT4G26260.1 CDS ID=AT4G26260.1; Parent=AT4G26260; Name=AT4G26260.1; Note=myo-inositol oxygenase 4; curator_summary=Encodes a myo-inositol oxygenase.; conf_class=2; symbol=MIOX4; full_name=myo-inositol oxygenase 4; computational_description=myo-inositol oxygenase 4 (MIOX4)%3B FUNCTIONS IN: inositol oxygenase activity%3B INVOLVED IN: L-ascorbic acid biosynthetic process%2C syncytium formation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828)%3B BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 5 (TAIR:AT5G56640.1)%3B Has 490 Blast hits to 486 proteins in 159 species: Archae - 0%3B Bacteria - 27%3B Metazoa - 132%3B Fungi - 132%3B Plants - 97%3B Viruses - 0%3B Other Eukaryotes - 102 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:14976233, PMID:15660207, PMID:16299181, PMID:16916443, PMID:17217462, PMID:18775970, PMID:19091876, PMID:19691674, PMID:21357184, PMID:21394467, PMID:21534971, PMID:22639659, PMID:24117492, PMID:24361507, PMID:24013762, locus:2136839; locus_type=protein_coding COOR W/13297939-13297969,13298157-13298298,13298448-13298529,13298662-13298866,13298974-13299033,13299124-13299176,13299342-13299464,13299575-13299644,13299742-13299820,13299914-13299995,13300120-13300146 HITS DR354181 [GenBank] TYPE ESTs EVAL e-147 LOCN Exon COOR W/13297698-13297969,13298157-13298299,13298450-13298531,13298664-13298733 HITS DR354180 [GenBank] TYPE ESTs EVAL e-110 LOCN Exon COOR W/13297855-13297968,13298156-13298299,13298449-13298529,13298662-13298866,13298974-13299017 NOTE ES107426 ES121115 EL268984 EL303323 EL099945 ES010391 HITS AY232552 [GenBank] TYPE Community cDNA EVAL 99.69 LOCN Exon COOR W/13297939-13297969,13298157-13298298,13298448-13298529,13298662-13298866,13298974-13299033,13299124-13299176,13299342-13299464,13299575-13299645,13299742-13299820,13299914-13299996,13300120-13300146 HITS C103414 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR W/13297939-13297969,13298157-13298298,13298448-13298529,13298662-13298866,13298974-13299033,13299124-13299176,13299342-13299464,13299575-13299644,13299742-13299820,13299914-13299995,13300120-13300177 NOTE AY142501 HITS GC103414 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR W/13297939-13297969,13298157-13298298,13298448-13298529,13298662-13298866,13298974-13299033,13299124-13299176,13299342-13299464,13299575-13299644,13299742-13299820,13299914-13299995,13300120-13300177 NOTE C103414 AY142501 pENTR_Sfi HITS GGTATTTGGTCGCAGGG [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/13298433-13298450 NOTE 2, +0 1 0 0 0, +1 10 0 0 0 HITS AAACTGTCGACTTTGTA [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/13298516-13298532 NOTE 1, +0 4 0 0 0 HITS AGATCTGGATCACTCTC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/13298752-13298768 NOTE 1, +0 5 0 0 0 HITS DR353921 [GenBank] TYPE ESTs EVAL 9e-66 LOCN Exon COOR W/13298753-13298866,13298974-13299035,13299126-13299174,13299340-13299466,13299577-13299644,13299742-13299820,13299914-13299995 HITS 254001_at [gAtlas] TYPE Affy Probes EVAL 8e-66 LOCN Exon COOR W/13298773-13298866,13298974-13299035,13299126-13299174,13299340-13299466,13299577-13299644,13299742-13299820,13299914-13299985 HITS GATCTTGGGAAAGTTAT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/13298973-13298989 NOTE 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 18 HITS BP642670 [GenBank] TYPE ESTs EVAL 1e-98 LOCN Exon COOR C/13300108-13300370 NOTE EG514189 HITS EG514190 [GenBank] TYPE ESTs EVAL e-147 LOCN Exon COOR W/13300120-13300387 HITS CATGGAGGATTAGT [About SAGE] TYPE SAGE Target EVAL 100 LOCN 300-UTR3 COOR W/13300170-13300183