CLON BP625322[GenBank] 
TYPE ESTs
CHRO chr4
EVAL 5e-88
COOR W/13313772-13314027,13314118-13314184,13314523-13314587

HITS AT4G26300.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26300.1 CDS ID=AT4G26300.1; Parent=AT4G26300; Name=AT4G26300.1; Note=Arginyl-tRNA synthetase%2C class Ic; conf_class=4; symbol=emb1027; full_name=embryo defective 1027; computational_description=embryo defective 1027 (emb1027)%3B FUNCTIONS IN: nucleotide binding%2C aminoacyl-tRNA ligase activity%2C arginine-tRNA ligase activity%2C ATP binding%3B INVOLVED IN: arginyl-tRNA aminoacylation%2C embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase%2C class I%2C conserved site (InterPro:IPR001412)%2C DALR anticodon binding (InterPro:IPR008909)%2C Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)%2C Arginyl-tRNA synthetase%2C class Ic%2C core (InterPro:IPR015945)%2C Arginyl tRNA synthetase%2C class Ic%2C N-terminal (InterPro:IPR005148)%2C Aminoacyl-tRNA synthetase%2C class 1a%2C anticodon-binding (InterPro:IPR009080)%2C Arginyl-tRNA synthetase%2C class Ic (InterPro:IPR001278)%3B BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase%2C class Ic (TAIR:AT1G66530.1)%3B Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263%3B Bacteria - 5535%3B Metazoa - 273%3B Fungi - 189%3B Plants - 85%3B Viruses - 3%3B Other Eukaryotes - 3070 (source: NCBI BLink).; conf_rating=***; Dbxref=PMID:11779812, PMID:15829605, PMID:16251277, PMID:16297076, PMID:16776300, PMID:18650403, PMID:18775970, locus:2136794; locus_type=protein_coding LOCN 1000-Promotor COOR C/13308400-13308510,13308624-13308722,13308817-13308885,13309271-13309360,13309442-13309511,13309694-13309763,13309869-13310055,13310159-13310243,13310414-13310592,13310693-13310797,13310911-13310994,13311124-13311204,13311312-13311527,13311617-13311718,13311797-13311872,13311970-13312109,13312196-13312270,13313020-13313109 HITS AT4G26300.5[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26300.5 CDS ID=AT4G26300.5; Parent=AT4G26300; Name=AT4G26300.5; Note=Arginyl-tRNA synthetase%2C class Ic; symbol=emb1027; full_name=embryo defective 1027; computational_description=embryo defective 1027 (emb1027)%3B FUNCTIONS IN: nucleotide binding%2C aminoacyl-tRNA ligase activity%2C arginine-tRNA ligase activity%2C ATP binding%3B INVOLVED IN: arginyl-tRNA aminoacylation%2C embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase%2C class I%2C conserved site (InterPro:IPR001412)%2C DALR anticodon binding (InterPro:IPR008909)%2C Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)%2C Arginyl-tRNA synthetase%2C class Ic%2C core (InterPro:IPR015945)%2C Arginyl tRNA synthetase%2C class Ic%2C N-terminal (InterPro:IPR005148)%2C Aminoacyl-tRNA synthetase%2C class 1a%2C anticodon-binding (InterPro:IPR009080)%2C Arginyl-tRNA synthetase%2C class Ic (InterPro:IPR001278)%3B BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase%2C class Ic (TAIR:AT1G66530.1)%3B Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263%3B Bacteria - 5535%3B Metazoa - 273%3B Fungi - 189%3B Plants - 85%3B Viruses - 3%3B Other Eukaryotes - 3070 (source: NCBI BLink).; Dbxref=PMID:11779812, PMID:15829605, PMID:16251277, PMID:16297076, PMID:16776300, PMID:18650403, PMID:18775970, locus:2136794; locus_type=protein_coding LOCN 1000-Promotor COOR C/13308400-13308510,13308624-13308722,13308817-13308885,13309271-13309360,13309442-13309511,13309694-13309763,13309869-13310055,13310159-13310243,13310414-13310592,13310693-13310797,13310911-13310994,13311124-13311204,13311312-13311527,13311617-13311718,13311797-13311872,13311970-13312109,13312196-13312266,13312648-13312774 HITS AT4G26310.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26310.1 CDS ID=AT4G26310.1; Parent=AT4G26310; Name=AT4G26310.1; Note=elongation factor P (EF-P) family protein; conf_class=2; computational_description=elongation factor P (EF-P) family protein%3B FUNCTIONS IN: translation elongation factor activity%3B INVOLVED IN: translational elongation%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation elongation factor P/YeiP%2C conserved site (InterPro:IPR013852)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C KOW-like (InterPro:IPR013185)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Elongation factor P%2C C-terminal (InterPro:IPR015365)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Translation elongation factor P/YeiP%2C central (InterPro:IPR001059)%3B BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:14576160, locus:2136804; locus_type=protein_coding LOCN Exon COOR C/13314006-13314018,13314116-13314183,13314309-13314348,13314526-13314649,13314838-13314905,13315015-13315081,13315234-13315303,13315420-13315470,13315563-13315576,13315665-13315695,13315836-13316066 HITS AT4G26310.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26310.2 CDS ID=AT4G26310.2; Parent=AT4G26310; Name=AT4G26310.2; Note=elongation factor P (EF-P) family protein; conf_class=6; computational_description=elongation factor P (EF-P) family protein%3B FUNCTIONS IN: translation elongation factor activity%3B INVOLVED IN: translational elongation%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation elongation factor P/YeiP%2C conserved site (InterPro:IPR013852)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C KOW-like (InterPro:IPR013185)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Elongation factor P%2C C-terminal (InterPro:IPR015365)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Translation elongation factor P/YeiP%2C central (InterPro:IPR001059)%3B BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).; conf_rating=**; Dbxref=PMID:14576160, locus:2136804; locus_type=protein_coding LOCN Exon COOR C/13314147-13314236,13314309-13314348,13314526-13314649,13314838-13314905,13315015-13315081,13315234-13315303,13315420-13315470,13315563-13315576,13315665-13315695,13315836-13316066