CLON AU237021[GenBank] 
TYPE ESTs
CHRO chr4
EVAL 7e-94
COOR W/13384062-13384105,13384489-13384662,13384765-13384854,13385143-13385209,13385541-13385658
NOTE EH805478 DR266964 

HITS AT4G26500.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26500.1 CDS ID=AT4G26500.1; Parent=AT4G26500; Name=AT4G26500.1; Note=chloroplast sulfur E; curator_summary=Sulfur acceptor that interacts with and activates the cysteine desulfurases%2C AtSufS in plastids and AtNifS1 in mitochondria%2C and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues%2C with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; conf_class=1; symbol=CPSUFE; Alias=ATSUFE, ARABIDOPSIS THALIANA SULFUR E, EMB1374, MBRYO DEFECTIVE 1374, SUFE1, SULFUR E 1; full_name=chloroplast sulfur E; computational_description=chloroplast sulfur E (CPSUFE)%3B FUNCTIONS IN: enzyme activator activity%2C transcription regulator activity%3B INVOLVED IN: iron-sulfur cluster assembly%2C embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%2C chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808)%2C BolA-like protein (InterPro:IPR002634)%3B BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:11826309, PMID:14576160, PMID:15266054, PMID:16437155, PMID:16455656, PMID:17337631, PMID:17452319, PMID:18493040, PMID:19028964, PMID:18978034, PMID:24203231, PMID:24714563, locus:2131488; locus_type=protein_coding LOCN 1000-Promotor COOR C/13382456-13383571 HITS AT4G26510.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26510.1 CDS ID=AT4G26510.1; Parent=AT4G26510; Name=AT4G26510.1; Note=uridine kinase-like 4; curator_summary=One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870%2C At3g27190%2C At1g55810%2C At4g26510 and At3g27440) show a high level of identity%2C and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1)%2C UKL2%2C UKL3%2C UKL4 and UKL5%2C respectively.; conf_class=2; symbol=UKL4; full_name=uridine kinase-like 4; computational_description=uridine kinase-like 4 (UKL4)%3B FUNCTIONS IN: uracil phosphoribosyltransferase activity%2C phosphotransferase activity%2C alcohol group as acceptor%2C kinase activity%2C ATP binding%3B INVOLVED IN: biosynthetic process%2C metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083)%2C Uridine kinase (InterPro:IPR000764)%3B BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3)%3B Has 12621 Blast hits to 12607 proteins in 2610 species: Archae - 215%3B Bacteria - 9586%3B Metazoa - 520%3B Fungi - 503%3B Plants - 574%3B Viruses - 2%3B Other Eukaryotes - 1221 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:17143579, PMID:18650403, PMID:19563437, PMID:21828290, locus:2131498; locus_type=protein_coding LOCN Exon COOR W/13384503-13384659,13384762-13384853,13385142-13385211,13385543-13385655,13385862-13385958,13386134-13386213,13386397-13386591,13386677-13386760,13386852-13386912,13387033-13387093,13387196-13387289,13387361-13387433,13387571-13387653,13387771-13387920 HITS AT4G26510.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26510.2 CDS ID=AT4G26510.2; Parent=AT4G26510; Name=AT4G26510.2; Note=uridine kinase-like 4; curator_summary=One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870%2C At3g27190%2C At1g55810%2C At4g26510 and At3g27440) show a high level of identity%2C and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1)%2C UKL2%2C UKL3%2C UKL4 and UKL5%2C respectively.; conf_class=2; symbol=UKL4; full_name=uridine kinase-like 4; computational_description=uridine kinase-like 4 (UKL4)%3B FUNCTIONS IN: uracil phosphoribosyltransferase activity%2C phosphotransferase activity%2C alcohol group as acceptor%2C kinase activity%2C ATP binding%3B INVOLVED IN: biosynthetic process%2C metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083)%2C Uridine kinase (InterPro:IPR000764)%3B BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3)%3B Has 12621 Blast hits to 12607 proteins in 2610 species: Archae - 215%3B Bacteria - 9586%3B Metazoa - 520%3B Fungi - 503%3B Plants - 574%3B Viruses - 2%3B Other Eukaryotes - 1221 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:17143579, PMID:18650403, PMID:19563437, PMID:21828290, locus:2131498; locus_type=protein_coding LOCN Exon COOR W/13384503-13384659,13384762-13384853,13385142-13385211,13385543-13385655,13385862-13385958,13386134-13386213,13386397-13386591,13386677-13386760,13386852-13386912,13387033-13387093,13387196-13387289,13387361-13387433,13387571-13387653,13387771-13387920 HITS AT4G26510.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26510.3 CDS ID=AT4G26510.3; Parent=AT4G26510; Name=AT4G26510.3; Note=uridine kinase-like 4; symbol=UKL4; full_name=uridine kinase-like 4; Dbxref=PMID:17143579, PMID:18650403, PMID:19563437, PMID:21828290, locus:2131498; curator_summary=One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870%2C At3g27190%2C At1g55810%2C At4g26510 and At3g27440) show a high level of identity%2C and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1)%2C UKL2%2C UKL3%2C UKL4 and UKL5%2C respectively.; computational_description=uridine kinase-like 4 (UKL4)%3B FUNCTIONS IN: uracil phosphoribosyltransferase activity%2C phosphotransferase activity%2C alcohol group as acceptor%2C kinase activity%2C ATP binding%3B INVOLVED IN: biosynthetic process%2C metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083)%2C Uridine kinase (InterPro:IPR000764)%3B BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3)%3B Has 12621 Blast hits to 12607 proteins in 2610 species: Archae - 215%3B Bacteria - 9586%3B Metazoa - 520%3B Fungi - 503%3B Plants - 574%3B Viruses - 2%3B Other Eukaryotes - 1221 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR W/13384503-13384659,13384762-13384853,13385142-13385211,13385543-13385655,13385862-13385958,13386134-13386213,13386397-13386591,13386677-13386760,13386852-13386912,13387033-13387093,13387196-13387289,13387361-13387433,13387571-13387653,13387771-13387920 HITS AT4G26510.4[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26510.4 CDS ID=AT4G26510.4; Parent=AT4G26510; Name=AT4G26510.4; Note=uridine kinase-like 4; symbol=UKL4; full_name=uridine kinase-like 4; Dbxref=PMID:17143579, PMID:18650403, PMID:19563437, PMID:21828290, locus:2131498; curator_summary=One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870%2C At3g27190%2C At1g55810%2C At4g26510 and At3g27440) show a high level of identity%2C and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1)%2C UKL2%2C UKL3%2C UKL4 and UKL5%2C respectively.; computational_description=uridine kinase-like 4 (UKL4)%3B FUNCTIONS IN: uracil phosphoribosyltransferase activity%2C phosphotransferase activity%2C alcohol group as acceptor%2C kinase activity%2C ATP binding%3B INVOLVED IN: biosynthetic process%2C metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083)%2C Uridine kinase (InterPro:IPR000764)%3B BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3)%3B Has 12621 Blast hits to 12607 proteins in 2610 species: Archae - 215%3B Bacteria - 9586%3B Metazoa - 520%3B Fungi - 503%3B Plants - 574%3B Viruses - 2%3B Other Eukaryotes - 1221 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR W/13384503-13384659,13384762-13384853,13385142-13385211,13385543-13385655,13385862-13385958,13386134-13386213,13386397-13386591,13386677-13386760,13386852-13386912,13387033-13387093,13387196-13387289,13387361-13387433,13387571-13387653,13387771-13387920