CLON RAFL22-81-A06[NCBI] [Order from RIKEN BRC] 
TYPE RIKEN FL cDNA
CHRO chr4
EVAL 99.49
COOR C/13372430-13372557,13372544-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374968,13375615-13375966

HITS AT4G26470.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26470.3 CDS ID=AT4G26470.3; Parent=AT4G26470; Name=AT4G26470.3; Note=Calcium-binding EF-hand family protein; computational_description=Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1)%3B Has 9300 Blast hits to 7546 proteins in 1004 species: Archae - 0%3B Bacteria - 25%3B Metazoa - 3748%3B Fungi - 1101%3B Plants - 3090%3B Viruses - 0%3B Other Eukaryotes - 1336 (source: NCBI BLink).; Dbxref=PMID:12372144, PMID:12913156, PMID:12912986, PMID:15720654, PMID:16023399, PMID:18775970, PMID:19686372, locus:2131458; locus_type=protein_coding LOCN 300-UTR3 COOR W/13371188-13371575,13371654-13371856,13371964-13372132,13372219-13372343 HITS AT4G26470.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26470.1 CDS ID=AT4G26470.1; Parent=AT4G26470; Name=AT4G26470.1; Note=Calcium-binding EF-hand family protein; conf_class=1; computational_description=Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1)%3B Has 9300 Blast hits to 7546 proteins in 1004 species: Archae - 0%3B Bacteria - 25%3B Metazoa - 3748%3B Fungi - 1101%3B Plants - 3090%3B Viruses - 0%3B Other Eukaryotes - 1336 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:12372144, PMID:12913156, PMID:12912986, PMID:15720654, PMID:16023399, PMID:18775970, PMID:19686372, locus:2131458; locus_type=protein_coding LOCN 300-UTR3 COOR W/13371377-13371575,13371654-13371856,13371964-13372132,13372219-13372343 HITS AT4G26470.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26470.2 CDS ID=AT4G26470.2; Parent=AT4G26470; Name=AT4G26470.2; Note=Calcium-binding EF-hand family protein; conf_class=2; computational_description=Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1)%3B Has 9300 Blast hits to 7546 proteins in 1004 species: Archae - 0%3B Bacteria - 25%3B Metazoa - 3748%3B Fungi - 1101%3B Plants - 3090%3B Viruses - 0%3B Other Eukaryotes - 1336 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:12372144, PMID:12913156, PMID:12912986, PMID:15720654, PMID:16023399, PMID:18775970, PMID:19686372, locus:2131458; locus_type=protein_coding LOCN 300-UTR3 COOR W/13371377-13371575,13371654-13371856,13371964-13372197 HITS AT4G26480.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26480.1 CDS ID=AT4G26480.1; Parent=AT4G26480; Name=AT4G26480.1; Note=RNA-binding KH domain-containing protein; conf_class=1; computational_description=RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=*****; Dbxref=locus:2131468; locus_type=protein_coding LOCN Exon COOR C/13372885-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374968,13375615-13375793 HITS AT4G26480.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26480.2 CDS ID=AT4G26480.2; Parent=AT4G26480; Name=AT4G26480.2; Note=RNA-binding KH domain-containing protein; computational_description=RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; Dbxref=locus:2131468; locus_type=protein_coding LOCN Exon COOR C/13372885-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374892 HITS AT4G26480.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26480.3 CDS ID=AT4G26480.3; Parent=AT4G26480; Name=AT4G26480.3; Note=RNA-binding KH domain-containing protein; Dbxref=locus:2131468; computational_description=RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/13372885-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374968,13375615-13375793 HITS AT4TE62865[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4TE62865 transposable_element ID=AT4TE62865; Name=AT4TE62865; Alias=VANDAL4 LOCN Exon COOR W/13374710-13374986 HITS AT4G07655.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G07655.1 antisense_lncRNA ID=AT4G07655.1; Parent=AT4G07655; Name=AT4G07655.1; description=Natural antisense transcript overlaps with AT4G26480; Note=Natural antisense transcript overlaps with AT4G26480; locus_type=antisense_long_noncoding_rna LOCN Exon COOR W/13375093-13375318 CLON RAFL22-81-A06[NCBI] [Order from RIKEN BRC] TYPE RIKEN EST CHRO chr4 EVAL e-105 COOR W/13375612-13375725,13375774-13375966 HITS AT4G26480.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26480.1 CDS ID=AT4G26480.1; Parent=AT4G26480; Name=AT4G26480.1; Note=RNA-binding KH domain-containing protein; conf_class=1; computational_description=RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; conf_rating=*****; Dbxref=locus:2131468; locus_type=protein_coding LOCN Exon COOR C/13372885-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374968,13375615-13375793 HITS AT4G26480.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26480.2 CDS ID=AT4G26480.2; Parent=AT4G26480; Name=AT4G26480.2; Note=RNA-binding KH domain-containing protein; computational_description=RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; Dbxref=locus:2131468; locus_type=protein_coding LOCN 1000-Promotor COOR C/13372885-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374892 HITS AT4G26480.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G26480.3 CDS ID=AT4G26480.3; Parent=AT4G26480; Name=AT4G26480.3; Note=RNA-binding KH domain-containing protein; Dbxref=locus:2131468; computational_description=RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/13372885-13373031,13373124-13373267,13373350-13373466,13373542-13373655,13374133-13374272,13374883-13374968,13375615-13375793 HITS AT4G07655.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G07655.1 antisense_lncRNA ID=AT4G07655.1; Parent=AT4G07655; Name=AT4G07655.1; description=Natural antisense transcript overlaps with AT4G26480; Note=Natural antisense transcript overlaps with AT4G26480; locus_type=antisense_long_noncoding_rna LOCN 300-UTR3 COOR W/13375093-13375318