CLON GATCTTGTCATCTTTTT[About MPSS mRNA] 
TYPE MPSS mRNA Target
CHRO chr1
EVAL 100.00
COOR W/2573607-2573623
NOTE 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 5 0


CLON GATCTTGTCATCTTTTT[About MPSS mRNA] 
TYPE MPSS mRNA Target
CHRO chr1
EVAL 100.00
COOR W/31793-31809
NOTE 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 5 0

HITS AT1G01050.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01050.1 CDS ID=AT1G01050.1; Parent=AT1G01050; Name=AT1G01050.1; Note=pyrophosphorylase 1; curator_summary=Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; conf_class=2; symbol=PPa1; Alias=AtPPa1, pyrophosphorylase 1; full_name=pyrophosphorylase 1; computational_description=pyrophosphorylase 1 (PPa1)%3B FUNCTIONS IN: inorganic diphosphatase activity%3B INVOLVED IN: phosphate metabolic process%2C metabolic process%3B LOCATED IN: nucleus%2C membrane%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162)%3B BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1)%3B Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172%3B Bacteria - 4313%3B Metazoa - 247%3B Fungi - 261%3B Plants - 270%3B Viruses - 0%3B Other Eukaryotes - 724 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:15135060, PMID:15610358, PMID:15703057, PMID:18775970, PMID:22566496, PMID:23438466, PMID:25663508, locus:2200965; locus_type=protein_coding LOCN Exon COOR C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 HITS AT1G01050.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01050.2 CDS ID=AT1G01050.2; Parent=AT1G01050; Name=AT1G01050.2; Note=pyrophosphorylase 1; symbol=PPa1; Alias=AtPPa1, pyrophosphorylase 1; full_name=pyrophosphorylase 1; Dbxref=PMID:15135060, PMID:15610358, PMID:15703057, PMID:18775970, PMID:22566496, PMID:23438466, PMID:25663508, locus:2200965; curator_summary=Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; computational_description=pyrophosphorylase 1 (PPa1)%3B FUNCTIONS IN: inorganic diphosphatase activity%3B INVOLVED IN: phosphate metabolic process%2C metabolic process%3B LOCATED IN: nucleus%2C membrane%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162)%3B BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1)%3B Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172%3B Bacteria - 4313%3B Metazoa - 247%3B Fungi - 261%3B Plants - 270%3B Viruses - 0%3B Other Eukaryotes - 724 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 HITS AT1G03997.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G03997.1 antisense_lncRNA ID=AT1G03997.1; Parent=AT1G03997; Name=AT1G03997.1; description=Natural antisense transcript overlaps with AT1G01050; Note=Natural antisense transcript overlaps with AT1G01050; locus_type=antisense_long_noncoding_rna LOCN 1000-Promotor COOR W/32727-33009 CLON GATCTTGTCATCTTTTT[About MPSS mRNA] TYPE MPSS mRNA Target CHRO chr4 EVAL 100.00 COOR C/627356-627372 NOTE 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 5 0 HITS AT4G01480.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G01480.1 CDS ID=AT4G01480.1; Parent=AT4G01480; Name=AT4G01480.1; Note=pyrophosphorylase 5; curator_summary=Encodes a protein that might have inorganic pyrophosphatase activity.; conf_class=2; symbol=PPa5; Alias=AtPPa5, pyrophosphorylase 5; full_name=pyrophosphorylase 5; computational_description=pyrophosphorylase 5 (PPa5)%3B FUNCTIONS IN: inorganic diphosphatase activity%2C pyrophosphatase activity%3B INVOLVED IN: phosphate metabolic process%2C metabolic process%3B LOCATED IN: membrane%2C cytoplasm%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162)%3B BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1)%3B Has 5969 Blast hits to 5969 proteins in 1836 species: Archae - 171%3B Bacteria - 4299%3B Metazoa - 244%3B Fungi - 260%3B Plants - 269%3B Viruses - 0%3B Other Eukaryotes - 726 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:12753585, PMID:15135060, PMID:16247729, PMID:16307366, PMID:18775970, PMID:25663508, locus:2116997; locus_type=protein_coding LOCN Exon COOR W/626539-626674,626750-626778,626856-626921,627002-627109,627192-627257,627352-627472,627553-627634,627716-627758 HITS AT4G01480.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G01480.2 CDS ID=AT4G01480.2; Parent=AT4G01480; Name=AT4G01480.2; Note=pyrophosphorylase 5; symbol=PPa5; Alias=AtPPa5, pyrophosphorylase 5; full_name=pyrophosphorylase 5; Dbxref=PMID:12753585, PMID:15135060, PMID:16247729, PMID:16307366, PMID:18775970, PMID:25663508, locus:2116997; curator_summary=Encodes a protein that might have inorganic pyrophosphatase activity.; computational_description=pyrophosphorylase 5 (PPa5)%3B FUNCTIONS IN: inorganic diphosphatase activity%2C pyrophosphatase activity%3B INVOLVED IN: phosphate metabolic process%2C metabolic process%3B LOCATED IN: membrane%2C cytoplasm%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162)%3B BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1)%3B Has 5969 Blast hits to 5969 proteins in 1836 species: Archae - 171%3B Bacteria - 4299%3B Metazoa - 244%3B Fungi - 260%3B Plants - 269%3B Viruses - 0%3B Other Eukaryotes - 726 (source: NCBI BLink).; locus_type=protein_coding LOCN Exon COOR W/626539-626674,626750-626778,626856-626921,627002-627109,627192-627257,627352-627472,627553-627634,627716-627758