CODE AT1G01150.3 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene CHRO chr1 TITL AT1G01150.3 CDS ID=AT1G01150.3; Parent=AT1G01150; Name=AT1G01150.3; Note=Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein; computational_description=Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Homeodomain-related (InterPro:IPR012287)%2C MYB-like (InterPro:IPR017877)%3B BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1)%3B Has 94 Blast hits to 77 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 0%3B Plants - 86%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink).; Dbxref=PMID:15703057, PMID:16481336, locus:2035372; locus_type=protein_coding COOR C/70828-70968,71041-71721,71942-71998 HITS GATCGGAGGAATTACGA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/70863-70879 NOTE 0 20 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 HITS EG491375 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/71328-71720,71942-72145 NOTE EG491372 EG491371 EG491376 EG491377 EG491378 EG491379 EG491380 EG491381 EG491382 EG491383 EG491384 EG491386 EG491388 EG491389 EG491390 EG491392 EG491393 EG491394 EG491395 EG491391 EG491387 HITS ES182075 [GenBank] TYPE ESTs EVAL 9e-30 LOCN 1000-Promotor COOR W/72339-72412 NOTE EL992476 ES042427 HITS ES211121 [GenBank] TYPE ESTs EVAL 8e-27 LOCN 1000-Promotor COOR W/72345-72413 HITS DR283666 [GenBank] TYPE ESTs EVAL e-178 LOCN 1000-Promotor COOR W/72350-72669,73087-73166,73290-73357 NOTE DR283669 ES039190 BE530018 DR283665 DR283667 HITS BX841803 [GenBank] [Order] TYPE GSLT cDNA EVAL e-172 LOCN 1000-Promotor COOR W/72357-72669,73087-73163,73287-73393,73486-73741,73822-74096 HITS DR283664 [GenBank] TYPE ESTs EVAL e-166 LOCN 1000-Promotor COOR W/72371-72669,73087-73163,73287-73393,73486-73676 NOTE AV821553 BP823811 BP834088 F14390 AV550033 AV553796 EL332238 EL137885 ES200607 AV824087 DR283668 DR283670 DR283671 BX835419 BP812429 BP836651 EH847530 HITS RAFL04-13-H03 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN 1000-Promotor COOR C/72376-72844 HITS AY102640 [GenBank] TYPE Community cDNA EVAL 98.56 LOCN 1000-Promotor COOR W/72379-72669,73087-73163,73287-73395,73488-73740,73822-74050 HITS RAFL06-13-G16 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-136 LOCN 1000-Promotor COOR C/72418-72669,73087-73163,73287-73393,73486-73718 HITS R13413 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.89 LOCN 1000-Promotor COOR W/72419-72669,73087-73163,73287-73395,73488-73740,73822-74046 NOTE AF410307 HITS BX835419 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN 1000-Promotor COOR W/72431-73401 HITS GATCCAAACGCAGGAAA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 1000-Promotor COOR C/72484-72500 NOTE 1 0 0 0 0 0 6 0 0 0 26 0 0 0 0 0 0 HITS GATCGGTCTGGGTTTTG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 1000-Promotor COOR W/72497-72513 NOTE 0 0 0 0 0 0 2 0 0 0 0 0 0 6 0 0 0 HITS U13413 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN 1000-Promotor COOR W/72583-72669,73087-73163,73287-73395,73488-73740,73822-73883 NOTE AY102133 HITS G13413 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN 1000-Promotor COOR W/72583-72669,73087-73163,73287-73395,73488-73740,73822-73883 NOTE U13413 AY102133 pENTR_Sfi HITS 261582_at [gAtlas] TYPE Affy Probes EVAL 2e-71 LOCN 1000-Promotor COOR W/72606-72667,73085-73163,73287-73393,73486-73621