CODE AT1G01050.1 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene CHRO chr1 TITL AT1G01050.1 CDS ID=AT1G01050.1; Parent=AT1G01050; Name=AT1G01050.1; Note=pyrophosphorylase 1; curator_summary=Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; conf_class=2; symbol=PPa1; Alias=AtPPa1, pyrophosphorylase 1; full_name=pyrophosphorylase 1; computational_description=pyrophosphorylase 1 (PPa1)%3B FUNCTIONS IN: inorganic diphosphatase activity%3B INVOLVED IN: phosphate metabolic process%2C metabolic process%3B LOCATED IN: nucleus%2C membrane%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162)%3B BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1)%3B Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172%3B Bacteria - 4313%3B Metazoa - 247%3B Fungi - 261%3B Plants - 270%3B Viruses - 0%3B Other Eukaryotes - 724 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:15135060, PMID:15610358, PMID:15703057, PMID:18775970, PMID:22566496, PMID:23438466, PMID:25663508, locus:2200965; locus_type=protein_coding COOR C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 HITS AI996152 [GenBank] TYPE ESTs EVAL 0.0 LOCN 300-UTR3 COOR C/30437-30816,30902-31161 NOTE EH971167 ES104193 HITS BP789125 [GenBank] TYPE ESTs EVAL e-159 LOCN 300-UTR3 COOR C/30700-30814,30900-31183 NOTE EH988836 EL096532 EL137132 EL281260 HITS BP787533 [GenBank] TYPE ESTs EVAL 0.0 LOCN 300-UTR3 COOR C/30707-30814,30900-31227 NOTE AA651141 EL120669 EG522515 EH902174 HITS GATCTGTTGTTATTCGA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR W/31156-31172 NOTE 19 22 13 11 50 12 19 17 19 22 4 0 0 12 0 58 37 HITS BP655894 [GenBank] TYPE ESTs EVAL e-135 LOCN Exon COOR W/31170-31424,31521-31602 HITS RAFL08-11-E15 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 98.82 LOCN Exon COOR C/31183-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670,33029-33114 HITS AV535286 [GenBank] TYPE ESTs EVAL e-134 LOCN Exon COOR W/31184-31424,31521-31602,31693-31815,31935-32000,32090-32120 NOTE AV781745 AV787299 HITS R13796 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 100.00 LOCN Exon COOR C/31186-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670,33029-33114 NOTE AY052717 HITS RAFL06-74-O18 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-108 LOCN Exon COOR C/31188-31424,31521-31602,31693-31776 HITS AY085015 [GenBank] TYPE Community cDNA EVAL 99.90 LOCN Exon COOR C/31188-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670,33029-33148 HITS DR380507 [GenBank] TYPE ESTs EVAL e-116 LOCN Exon COOR C/31191-31424,31521-31602,31693-31815,31935-31996,32087-32193 NOTE AV806514 BP568979 BP571785 BP575972 AV815743 Z29202 BP783219 EH866522 AV783898 BP563653 BP629851 ES210801 ES159107 EH901232 ES098400 AI100063 EH830906 DR373797 AI994042 AI994013 AV561492 HITS R14690 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.78 LOCN Exon COOR C/31195-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670,33029-33117 NOTE AY057668 HITS RAFL09-46-O10 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-122 LOCN Exon COOR C/31197-31424,31521-31602,31693-31776 HITS RAFL05-14-F05 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-114 LOCN Exon COOR C/31209-31424,31521-31602,31693-31815,31935-31997,32087-32197,32284-32348,32432-32460 HITS R16094 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.78 LOCN Exon COOR C/31209-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670,33029-33118 NOTE AY065201 HITS U16094 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP Gateway Clone EVAL 100.00 LOCN Exon COOR C/31216-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 NOTE U16094 AY081555 pENTR-TOPO HITS AV537463 [GenBank] TYPE ESTs EVAL 2e-75 LOCN Exon COOR W/31270-31424,31521-31602,31693-31815,31935-31997,32087-32197,32284-32348 NOTE AV538108 HITS BX841824 [GenBank] [Order] TYPE GSLT cDNA EVAL 3e-63 LOCN Exon COOR C/31285-31424,31521-31602,31693-31815,31935-31997,32087-32197,32284-32348,32432-32458,32546-32672,33032-33107 HITS GATCCTAATTGATATTA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR C/31296-31312 NOTE 202 374 163 359 201 0 0 0 3 0 0 0 0 1 0 0 2 HITS U13796 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 NOTE BT001144 HITS G13796 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 NOTE U13796 BT001144 pENTR_Sfi HITS 261579_at [gAtlas] TYPE Affy Probes EVAL 2e-63 LOCN Exon COOR C/31393-31423,31520-31602,31693-31815,31935-31997,32087-32197,32284-32348,32432-32458,32546-32589 HITS BP560532 [GenBank] TYPE ESTs EVAL 1e-65 LOCN Exon COOR C/31397-31423,31519-31602,31693-31815,31935-31997,32087-32197,32284-32348,32432-32458,32546-32672,33031-33117 NOTE EH948412 EL306179 CK118158 CB255326 AV823010 ES206832 EH796247 ES078505 EL222213 AV824702 HITS DR243196 [GenBank] TYPE ESTs EVAL 1e-65 LOCN Exon COOR C/31692-31815,31935-31997,32087-32197,32284-32348,32432-32458,32546-32672,33031-33153 NOTE EH851529 EL166202 BP561551 ES212464 ES044197 CB255415 EH882263 EH889916 ES077272 EL027766 EL983594 DR243193 EL092824 EL105522 AV549347 EL163299 EL035678 EL113114 Z30903 EL330414 ES102149 ES078471 ES089629 EL059006 EL197398 EL192394 ES113165 EL149989 ES036780 ES179229 DR243194 DR243200 DR243195 N97307 EH802646 DR243202 T42316 BP799199 DR243199 DR243201 T76782 AV550260 BP835714 DR243197 BP797802 EH869605 EH851524 ES070901 EH994184 ES013757 BP843121 EL172292 EH841510 EL117757 EL198551 EL245240 EH975276 EH985768 ES068352 EL033857 DR243198 DR243203 EL107286 HITS GATCCTGAATATAAGCA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/31758-31774 NOTE 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 HITS GATCTTGTCATCTTTTT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/31793-31809 NOTE 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 5 0 HITS ASRP142139 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN Intron COOR C/31814-31836 HITS EG423994 [GenBank] TYPE ESTs EVAL e-110 LOCN 1000-Promotor COOR W/32986-33284 NOTE EH994199 EL056989 EH829812 EH848285 EH799460 ES215833 ES160062 ES152334 EH986917 EL046866 HITS BP781603 [GenBank] TYPE ESTs EVAL e-118 LOCN 1000-Promotor COOR W/33379-33597,33989-34180 NOTE BP782731 BP790455 AV793100 BP787483 AV518592 HITS RAFL07-43-F02 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.10 LOCN 1000-Promotor COOR C/33379-33589,33981-34327,34401-35474,35567-35647,35730-35963,36624-36685,36810-36921,37023-37111