CLON R11265[SSP] [About & Citation] [NCBI] [Order] - click RAFL 
TYPE SSP cDNA
CHRO chr1
EVAL 97.72
COOR C/50089-50337,50419-50631,50883-50963,51126-51182
NOTE AY050975

HITS AT1G01090.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01090.1 CDS ID=AT1G01090.1; Parent=AT1G01090; Name=AT1G01090.1; Note=pyruvate dehydrogenase E1 alpha; curator_summary=pyruvate dehydrogenase E1 alpha subunit; conf_class=2; symbol=PDH-E1 ALPHA; full_name=pyruvate dehydrogenase E1 alpha; computational_description=pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA)%3B FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity%3B INVOLVED IN: oxidation reduction%2C glycolysis%2C metabolic process%3B LOCATED IN: chloroplast%2C plastid%2C chloroplast envelope%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Dehydrogenase%2C E1 component (InterPro:IPR001017)%2C Pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit%2C subgroup y (InterPro:IPR017597)%3B BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1)%3B Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130%3B Bacteria - 6136%3B Metazoa - 517%3B Fungi - 241%3B Plants - 224%3B Viruses - 0%3B Other Eukaryotes - 2817 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:9393637, PMID:12084821, PMID:12805597, PMID:13677473, PMID:14576160, PMID:14682612, PMID:15052571, PMID:15173569, PMID:15561727, PMID:15703057, PMID:16553896, PMID:17419836, PMID:18650403, PMID:18616834, PMID:18689444, PMID:18775970, PMID:23505340, PMID:24023856, locus:2200980; locus_type=protein_coding LOCN 1000-Promotor COOR C/47705-47982,48075-48852,48936-49166 HITS AT1G01100.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01100.1 CDS ID=AT1G01100.1; Parent=AT1G01100; Name=AT1G01100.1; Note=60S acidic ribosomal protein family; conf_class=2; computational_description=60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C ribosome%2C nucleus%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2)%3B Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76%3B Bacteria - 0%3B Metazoa - 858%3B Fungi - 474%3B Plants - 451%3B Viruses - 0%3B Other Eukaryotes - 316 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11598216, PMID:12093376, PMID:14730065, PMID:15010618, PMID:15734919, PMID:15703057, PMID:17934214, PMID:18433157, PMID:18775970, PMID:22195043, locus:2200985; locus_type=protein_coding LOCN Exon COOR C/50284-50337,50419-50631,50883-50954 HITS AT1G01100.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01100.2 CDS ID=AT1G01100.2; Parent=AT1G01100; Name=AT1G01100.2; Note=60S acidic ribosomal protein family; conf_class=2; computational_description=60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C ribosome%2C nucleus%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2)%3B Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76%3B Bacteria - 0%3B Metazoa - 858%3B Fungi - 474%3B Plants - 451%3B Viruses - 0%3B Other Eukaryotes - 316 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11598216, PMID:12093376, PMID:14730065, PMID:15010618, PMID:15734919, PMID:15703057, PMID:17934214, PMID:18433157, PMID:18775970, PMID:22195043, locus:2200985; locus_type=protein_coding LOCN Exon COOR C/50284-50337,50419-50631,50883-50954 HITS AT1G01100.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01100.3 CDS ID=AT1G01100.3; Parent=AT1G01100; Name=AT1G01100.3; Note=60S acidic ribosomal protein family; conf_class=2; computational_description=60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C ribosome%2C nucleus%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2)%3B Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76%3B Bacteria - 0%3B Metazoa - 858%3B Fungi - 474%3B Plants - 451%3B Viruses - 0%3B Other Eukaryotes - 316 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11598216, PMID:12093376, PMID:14730065, PMID:15010618, PMID:15734919, PMID:15703057, PMID:17934214, PMID:18433157, PMID:18775970, PMID:22195043, locus:2200985; locus_type=protein_coding LOCN Exon COOR C/50284-50337,50419-50447,50496-50631,50883-50954 HITS AT1G01100.4[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01100.4 CDS ID=AT1G01100.4; Parent=AT1G01100; Name=AT1G01100.4; Note=60S acidic ribosomal protein family; conf_class=2; computational_description=60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C ribosome%2C nucleus%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2)%3B Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76%3B Bacteria - 0%3B Metazoa - 858%3B Fungi - 474%3B Plants - 451%3B Viruses - 0%3B Other Eukaryotes - 316 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:11598216, PMID:12093376, PMID:14730065, PMID:15010618, PMID:15734919, PMID:15703057, PMID:17934214, PMID:18433157, PMID:18775970, PMID:22195043, locus:2200985; locus_type=protein_coding LOCN Exon COOR C/50284-50337,50419-50631,50883-50954