AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON AAACCGCGATTTAACAG[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr2
EVAL 100.00
COOR W/16626001-16626017
NOTE 1, +0 1 0 0 0

HITS AT2TE74725[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT2TE74725 transposable_element ID=AT2TE74725; Name=AT2TE74725; Alias=SIMPLEHAT1 LOCN Exon COOR W/16625761-16626817 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr2 EVAL 100.00 COOR W/13793867-13793883 NOTE 1, +0 1 0 0 0 HITS AT2TE60750[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT2TE60750 transposable_element ID=AT2TE60750; Name=AT2TE60750; Alias=SIMPLEHAT1 LOCN Exon COOR W/13793630-13793825,13793811-13794625 HITS AT2G32490.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT2G32490.1 pseudogenic_transcript ID=AT2G32490.1; Parent=AT2G32490; Name=AT2G32490.1; curator_summary=pseudogene of 3'-5' exonuclease domain-containing protein; Note=pseudogene; Dbxref=locus:2060300; computational_description=pseudogene of Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein; locus_type=pseudogene LOCN 1000-Promotor COOR W/13794627-13795229 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr2 EVAL 100.00 COOR C/7442403-7442419 NOTE 1, +0 1 0 0 0 HITS AT2TE30510[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT2TE30510 transposable_element ID=AT2TE30510; Name=AT2TE30510; Alias=SIMPLEHAT1 LOCN Exon COOR C/7441676-7442657 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr1 EVAL 100.00 COOR C/28913413-28913429 NOTE 1, +0 1 0 0 0 HITS AT1TE94570[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1TE94570 transposable_element ID=AT1TE94570; Name=AT1TE94570; Alias=SIMPLEHAT1 LOCN Exon COOR C/28912664-28913487,28913474-28913670 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr1 EVAL 100.00 COOR C/13152654-13152670 NOTE 1, +0 1 0 0 0 HITS AT1TE42930[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1TE42930 transposable_element ID=AT1TE42930; Name=AT1TE42930; Alias=SIMPLEHAT1 LOCN Exon COOR C/13151880-13152923 HITS AT1G35617.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G35617.1 CDS ID=AT1G35617.1; Parent=AT1G35617; Name=AT1G35617.1; Note=hypothetical protein; conf_class=9; computational_description=unknown protein%3B Has 262 Blast hits to 207 proteins in 54 species: Archae - 0%3B Bacteria - 28%3B Metazoa - 70%3B Fungi - 8%3B Plants - 93%3B Viruses - 20%3B Other Eukaryotes - 43 (source: NCBI BLink).; conf_rating=*; Dbxref=locus:2824641; locus_type=protein_coding LOCN 1000-Promotor COOR W/13153583-13153948 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr1 EVAL 100.00 COOR W/55916-55932 NOTE 1, +0 1 0 0 0 HITS AT1TE00150[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1TE00150 transposable_element ID=AT1TE00150; Name=AT1TE00150; Alias=SIMPLEHAT1 LOCN Exon COOR W/55676-55873,55874-56576 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr3 EVAL 100.00 COOR C/21883242-21883258 NOTE 1, +0 1 0 0 0 HITS AT3TE89130[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3TE89130 transposable_element ID=AT3TE89130; Name=AT3TE89130; Alias=SIMPLEHAT1 LOCN Exon COOR C/21882627-21883302,21883301-21883496 HITS AT3TE89135[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3TE89135 transposable_element ID=AT3TE89135; Name=AT3TE89135; Alias=SIMPLEHAT1 LOCN 300-UTR3 COOR C/21883497-21883519 HITS AT3G09195.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G09195.1 lnc_RNA ID=AT3G09195.1; Parent=AT3G09195; Name=AT3G09195.1; locus_type=long_noncoding_rna LOCN 1000-Promotor COOR W/21883667-21883980 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr4 EVAL 100.00 COOR C/5293968-5293984 NOTE 1, +0 1 0 0 0 HITS AT4TE22040[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4TE22040 transposable_element ID=AT4TE22040; Name=AT4TE22040; Alias=SIMPLEHAT1 LOCN Exon COOR C/5292981-5294223 HITS AT4TE22045[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4TE22045 transposable_element ID=AT4TE22045; Name=AT4TE22045; Alias=HELITRONY3 LOCN 300-UTR3 COOR C/5294224-5294270 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr5 EVAL 100.00 COOR C/9802740-9802756 NOTE 1, +0 1 0 0 0 HITS AT5TE35650[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5TE35650 transposable_element ID=AT5TE35650; Name=AT5TE35650; Alias=HELITRONY3 LOCN 1000-Promotor COOR C/9801393-9801642,9802009-9802122 HITS AT5TE35660[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5TE35660 transposable_element ID=AT5TE35660; Name=AT5TE35660; Alias=SIMPLEHAT1 LOCN Exon COOR C/9802123-9802916 HITS AT5TE35665[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5TE35665 transposable_element ID=AT5TE35665; Name=AT5TE35665; Alias=SIMPLEHAT1 LOCN 300-UTR3 COOR C/9802917-9802966 CLON AAACCGCGATTTAACAG[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr5 EVAL 100.00 COOR C/13417998-13418014 NOTE 1, +0 1 0 0 0 HITS AT5TE47555[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT5TE47555 transposable_element ID=AT5TE47555; Name=AT5TE47555; Alias=SIMPLEHAT1 LOCN Exon COOR C/13417303-13418071,13418057-13418253

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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