AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON CATGTGTTTACTGA[About SAGE] 
TYPE SAGE Target
CHRO chr1
EVAL 100
COOR W/62804-62817

HITS AT1G01130.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G01130.1 CDS ID=AT1G01130.1; Parent=AT1G01130; Name=AT1G01130.1; Note=CBL-interacting Serine/Threonine-kinase; conf_class=3; computational_description=CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660)%2C Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1)%3B Has 176 Blast hits to 176 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 176%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:15703057, PMID:20226671, locus:2035357; locus_type=protein_coding LOCN Intron COOR C/61905-61949,62050-62124,63557-63811 CLON CATGTGTTTACTGA[About SAGE] TYPE SAGE Target CHRO chr3 EVAL 100 COOR W/7463632-7463645 HITS AT3G21250.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G21250.1 CDS ID=AT3G21250.1; Parent=AT3G21250; Name=AT3G21250.1; Note=multidrug resistance-associated protein 6; curator_summary=member of MRP subfamily; conf_class=4; symbol=ABCC8; Alias=ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6; full_name=ATP-binding cassette C8; computational_description=multidrug resistance-associated protein 6 (MRP6)%3B FUNCTIONS IN: ATPase activity%2C coupled to transmembrane movement of substances%3B INVOLVED IN: response to cyclopentenone%3B LOCATED IN: vacuolar membrane%2C plasma membrane%2C plant-type vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ABC transporter-like (InterPro:IPR003439)%2C ABC transporter integral membrane type 1 (InterPro:IPR017940)%2C ABC transporter%2C transmembrane domain%2C type 1 (InterPro:IPR011527)%2C ABC transporter%2C transmembrane domain (InterPro:IPR001140)%2C ABC transporter%2C conserved site (InterPro:IPR017871)%3B BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1)%3B Has 598023 Blast hits to 338310 proteins in 3899 species: Archae - 10844%3B Bacteria - 482752%3B Metazoa - 12132%3B Fungi - 7443%3B Plants - 6523%3B Viruses - 16%3B Other Eukaryotes - 78313 (source: NCBI BLink).; conf_rating=***; Dbxref=PMID:11346655, PMID:11855639, PMID:12430019, PMID:12376647, PMID:15381434, PMID:15824099, PMID:16618929, PMID:17164256, PMID:18065561, PMID:18307782, PMID:18299247, PMID:18334669, PMID:21078981, locus:2094721; locus_type=protein_coding LOCN 1000-Promotor COOR C/7457668-7457789,7457875-7458114,7458203-7458266,7458344-7458649,7458732-7458946,7459100-7459394,7459481-7459645,7459723-7460334,7460455-7460508,7460583-7460903,7461001-7462952,7463246-7463261 HITS AT3G21250.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G21250.2 CDS ID=AT3G21250.2; Parent=AT3G21250; Name=AT3G21250.2; Note=multidrug resistance-associated protein 6; curator_summary=member of MRP subfamily; conf_class=4; symbol=ABCC8; Alias=ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6; full_name=ATP-binding cassette C8; computational_description=multidrug resistance-associated protein 6 (MRP6)%3B FUNCTIONS IN: ATPase activity%2C coupled to transmembrane movement of substances%3B INVOLVED IN: response to cyclopentenone%3B LOCATED IN: vacuolar membrane%2C plasma membrane%2C plant-type vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ABC transporter-like (InterPro:IPR003439)%2C ABC transporter integral membrane type 1 (InterPro:IPR017940)%2C ABC transporter%2C transmembrane domain%2C type 1 (InterPro:IPR011527)%2C ABC transporter%2C transmembrane domain (InterPro:IPR001140)%2C ABC transporter%2C conserved site (InterPro:IPR017871)%3B BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1)%3B Has 598023 Blast hits to 338310 proteins in 3899 species: Archae - 10844%3B Bacteria - 482752%3B Metazoa - 12132%3B Fungi - 7443%3B Plants - 6523%3B Viruses - 16%3B Other Eukaryotes - 78313 (source: NCBI BLink).; conf_rating=***; Dbxref=PMID:11346655, PMID:11855639, PMID:12430019, PMID:12376647, PMID:15381434, PMID:15824099, PMID:16618929, PMID:17164256, PMID:18065561, PMID:18307782, PMID:18299247, PMID:18334669, PMID:21078981, locus:2094721; locus_type=protein_coding LOCN 1000-Promotor COOR C/7457668-7457789,7457875-7458114,7458203-7458266,7458344-7458649,7458732-7458946,7459100-7459394,7459481-7459645,7459723-7460334,7460422-7460508,7460583-7460903,7461001-7462952,7463246-7463261 HITS AT3G21250.4[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G21250.4 CDS ID=AT3G21250.4; Parent=AT3G21250; Name=AT3G21250.4; Note=multidrug resistance-associated protein 6; symbol=ABCC8; Alias=ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6; full_name=ATP-binding cassette C8; curator_summary=member of MRP subfamily; computational_description=multidrug resistance-associated protein 6 (MRP6)%3B FUNCTIONS IN: ATPase activity%2C coupled to transmembrane movement of substances%3B INVOLVED IN: response to cyclopentenone%3B LOCATED IN: vacuolar membrane%2C plasma membrane%2C plant-type vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ABC transporter-like (InterPro:IPR003439)%2C ABC transporter integral membrane type 1 (InterPro:IPR017940)%2C ABC transporter%2C transmembrane domain%2C type 1 (InterPro:IPR011527)%2C ABC transporter%2C transmembrane domain (InterPro:IPR001140)%2C ABC transporter%2C conserved site (InterPro:IPR017871)%3B BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1)%3B Has 598023 Blast hits to 338310 proteins in 3899 species: Archae - 10844%3B Bacteria - 482752%3B Metazoa - 12132%3B Fungi - 7443%3B Plants - 6523%3B Viruses - 16%3B Other Eukaryotes - 78313 (source: NCBI BLink).; Dbxref=PMID:11346655, PMID:11855639, PMID:12430019, PMID:12376647, PMID:15381434, PMID:15824099, PMID:16618929, PMID:17164256, PMID:18065561, PMID:18307782, PMID:18299247, PMID:18334669, PMID:21078981, locus:2094721; locus_type=protein_coding LOCN 300-UTR5 COOR C/7457668-7457789,7457875-7458114,7458203-7458266,7458344-7458649,7458732-7458946,7459100-7459394,7459481-7459645,7459723-7460334,7460422-7460508,7460583-7460903,7461001-7462952,7463356-7463389 HITS AT3G21250.5[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT3G21250.5 CDS ID=AT3G21250.5; Parent=AT3G21250; Name=AT3G21250.5; Note=multidrug resistance-associated protein 6; symbol=ABCC8; Alias=ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6; full_name=ATP-binding cassette C8; curator_summary=member of MRP subfamily; computational_description=multidrug resistance-associated protein 6 (MRP6)%3B FUNCTIONS IN: ATPase activity%2C coupled to transmembrane movement of substances%3B INVOLVED IN: response to cyclopentenone%3B LOCATED IN: vacuolar membrane%2C plasma membrane%2C plant-type vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ABC transporter-like (InterPro:IPR003439)%2C ABC transporter integral membrane type 1 (InterPro:IPR017940)%2C ABC transporter%2C transmembrane domain%2C type 1 (InterPro:IPR011527)%2C ABC transporter%2C transmembrane domain (InterPro:IPR001140)%2C ABC transporter%2C conserved site (InterPro:IPR017871)%3B BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1)%3B Has 598023 Blast hits to 338310 proteins in 3899 species: Archae - 10844%3B Bacteria - 482752%3B Metazoa - 12132%3B Fungi - 7443%3B Plants - 6523%3B Viruses - 16%3B Other Eukaryotes - 78313 (source: NCBI BLink).; Dbxref=PMID:11346655, PMID:11855639, PMID:12430019, PMID:12376647, PMID:15381434, PMID:15824099, PMID:16618929, PMID:17164256, PMID:18065561, PMID:18307782, PMID:18299247, PMID:18334669, PMID:21078981, locus:2094721; locus_type=protein_coding LOCN 300-UTR5 COOR C/7457668-7457789,7457875-7458114,7458203-7458266,7458344-7458649,7458732-7458946,7459100-7459394,7459481-7459645,7459723-7460334,7460455-7460508,7460583-7460903,7461001-7462952,7463356-7463389

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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