AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON CATGCATGTGTTTC[About SAGE] 
TYPE SAGE Target
CHRO chr4
EVAL 100
COOR W/15738665-15738678

HITS AT4G32630.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G32630.1 CDS ID=AT4G32630.1; Parent=AT4G32630; Name=AT4G32630.1; Note=ArfGap/RecO-like zinc finger domain-containing protein; conf_class=4; computational_description=ArfGap/RecO-like zinc finger domain-containing protein%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2)%3B Has 2836 Blast hits to 2808 proteins in 240 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 1420%3B Fungi - 478%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 450 (source: NCBI BLink).; conf_rating=***; Dbxref=PMID:16291648, PMID:18489709, PMID:18775970, PMID:23517122, locus:2125697; locus_type=protein_coding LOCN Intron COOR W/15738315-15738401,15738502-15738563,15738698-15738785,15738862-15738923,15739015-15739102,15739226-15739639,15739720-15740139,15740351-15740473,15740553-15740648,15740719-15740805,15740901-15741078,15741156-15741204,15741283-15741412 HITS AT4G32630.2[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G32630.2 CDS ID=AT4G32630.2; Parent=AT4G32630; Name=AT4G32630.2; Note=ArfGap/RecO-like zinc finger domain-containing protein; conf_class=5; computational_description=ArfGap/RecO-like zinc finger domain-containing protein%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2)%3B Has 2836 Blast hits to 2808 proteins in 240 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 1420%3B Fungi - 478%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 450 (source: NCBI BLink).; conf_rating=***; Dbxref=PMID:16291648, PMID:18489709, PMID:18775970, PMID:23517122, locus:2125697; locus_type=protein_coding LOCN Intron COOR W/15738315-15738401,15738502-15738563,15738698-15738785,15738862-15738923,15739015-15739102,15739226-15739639,15739720-15740139,15740351-15740473,15740553-15740648,15740716-15740805,15740901-15741078,15741156-15741204,15741283-15741412 HITS AT4G32630.3[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G32630.3 CDS ID=AT4G32630.3; Parent=AT4G32630; Name=AT4G32630.3; Note=ArfGap/RecO-like zinc finger domain-containing protein; Dbxref=PMID:16291648, PMID:18489709, PMID:18775970, PMID:23517122, locus:2125697; computational_description=ArfGap/RecO-like zinc finger domain-containing protein%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2)%3B Has 2836 Blast hits to 2808 proteins in 240 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 1420%3B Fungi - 478%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 450 (source: NCBI BLink).; locus_type=protein_coding LOCN Intron COOR W/15738315-15738401,15738502-15738563,15738698-15738785,15738862-15738923,15739015-15739102,15739226-15739639,15739720-15740139,15740351-15740473,15740553-15740648,15740719-15740805,15740901-15741078,15741156-15741204,15741283-15741412 HITS AT4G32630.4[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G32630.4 CDS ID=AT4G32630.4; Parent=AT4G32630; Name=AT4G32630.4; Note=ArfGap/RecO-like zinc finger domain-containing protein; Dbxref=PMID:16291648, PMID:18489709, PMID:18775970, PMID:23517122, locus:2125697; computational_description=ArfGap/RecO-like zinc finger domain-containing protein%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2)%3B Has 2836 Blast hits to 2808 proteins in 240 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 1420%3B Fungi - 478%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 450 (source: NCBI BLink).; locus_type=protein_coding LOCN Intron COOR W/15738315-15738401,15738502-15738563,15738698-15738785,15738862-15738923,15739015-15739102,15739226-15739639,15739720-15740139,15740351-15740473,15740553-15740648,15740719-15740805,15740901-15741078,15741156-15741204,15741283-15741412 HITS AT4G32630.5[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G32630.5 CDS ID=AT4G32630.5; Parent=AT4G32630; Name=AT4G32630.5; Note=ArfGap/RecO-like zinc finger domain-containing protein; Dbxref=PMID:16291648, PMID:18489709, PMID:18775970, PMID:23517122, locus:2125697; computational_description=ArfGap/RecO-like zinc finger domain-containing protein%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2)%3B Has 2836 Blast hits to 2808 proteins in 240 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 1420%3B Fungi - 478%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 450 (source: NCBI BLink).; locus_type=protein_coding LOCN Intron COOR W/15738315-15738401,15738502-15738563,15738698-15738785,15738862-15738923,15739015-15739102,15739226-15739639,15739720-15740139,15740351-15740473,15740553-15740648,15740719-15740805,15740901-15741078,15741156-15741204,15741283-15741412 HITS AT4G32630.6[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT4G32630.6 CDS ID=AT4G32630.6; Parent=AT4G32630; Name=AT4G32630.6; Note=ArfGap/RecO-like zinc finger domain-containing protein; Dbxref=PMID:16291648, PMID:18489709, PMID:18775970, PMID:23517122, locus:2125697; computational_description=ArfGap/RecO-like zinc finger domain-containing protein%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2)%3B Has 2836 Blast hits to 2808 proteins in 240 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 1420%3B Fungi - 478%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 450 (source: NCBI BLink).; locus_type=protein_coding LOCN Intron COOR W/15738315-15738401,15738502-15738563,15738698-15738785,15738862-15738923,15739015-15739102,15739226-15739639,15739720-15740139,15740351-15740473,15740553-15740648,15740719-15740805,15740901-15741078,15741156-15741204,15741283-15741412 CLON CATGCATGTGTTTC[About SAGE] TYPE SAGE Target CHRO chr2 EVAL 100 COOR W/12396151-12396164 CLON CATGCATGTGTTTC[About SAGE] TYPE SAGE Target CHRO chr1 EVAL 100 COOR W/43731-43744 HITS AT1G04003.1[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene TITL AT1G04003.1 lnc_RNA ID=AT1G04003.1; Parent=AT1G04003; Name=AT1G04003.1; locus_type=long_noncoding_rna LOCN 1000-Promotor COOR C/43087-43295

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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