AtTome: Genome Express Database ( Aug. 2, 2016 )


CODE AT1TE00150 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene CHRO chr1 TITL AT1TE00150 transposable_element ID=AT1TE00150; Name=AT1TE00150; Alias=SIMPLEHAT1 COOR W/55676-55873,55874-56576 HITS ASRP28086 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN Exon COOR W/55815-55838 HITS AAACCGCGATTTAACAG [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/55916-55932 NOTE 1, +0 1 0 0 0 HITS GTAAACTGTTAAATCGC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/55921-55950 NOTE 2, +0 1 0 0 0, +13 1 3 4 2 HITS ATTTAACATTTTCCCGC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56002-56018 NOTE 1, +0 0 3 0 1 HITS TTTTGGCGGGAAAATGT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56007-56029 NOTE 3, +0 4 0 0 0, +1 1 0 0 0, +6 1 0 0 0 HITS ATTTAACATTTTCCCGC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56080-56096 NOTE 1, +0 0 3 0 1 HITS TTTTGGCGGGAAAATGT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56085-56102 NOTE 2, +0 4 0 0 0, +1 1 0 0 0 HITS AATGATATTCAACATTT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56101-56117 NOTE 1, +0 0 1 1 1 HITS ATTTAACATTTTCCCGC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56134-56150 NOTE 1, +0 0 3 0 1 HITS TTTTGGCGGGAAAATGT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56139-56167 NOTE 4, +0 4 0 0 0, +1 1 0 0 0, +6 1 0 0 0, +12 2 0 0 0 HITS TTTTTCCCGCCAAAAAA [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56195-56211 NOTE 1, +0 6 0 0 0 HITS ATTTAACATTTTCCCGC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56245-56261 NOTE 1, +0 0 3 0 1 HITS TTTTGGCGGGAAAATGT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56250-56267 NOTE 2, +0 4 0 0 0, +1 1 0 0 0 HITS ATAAAAACCAAGTTGGG [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56407-56423 NOTE 1, +0 0 9 7 8 HITS GGGTACCCAACTTGGTT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56412-56440 NOTE 3, +0 0 6 0 2, +2 0 15 7 10, +12 0 1 1 1 HITS AATCAGGTTTTTTCGGG [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56446-56462 NOTE 1, +0 0 12 13 13 HITS CCCGAAAAAACCTGATT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56446-56462 NOTE 1, +0 0 1 1 1 HITS GTGGACGGGTTTATTTT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR W/56515-56550 NOTE 4, +0 0 0 2 1, +11 0 1 0 1, +17 5 0 0 0, +19 1 0 0 0 HITS GAACCCAAAATAAACCC [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN Exon COOR C/56521-56553 NOTE 3, +0 3 0 0 0, +11 4 0 0 0, +16 0 13 13 13 HITS CTGACTTGGCTTTTTAT [About MPSS sRNA] TYPE MPSS sRNA Contig EVAL 100.00 LOCN 300-UTR3 COOR W/56599-56615 NOTE 1, +0 0 0 1 1

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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