AtTome: Genome Express Database ( Aug. 2, 2016 )


CODE AT1G01110.1 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene CHRO chr1 TITL AT1G01110.1 CDS ID=AT1G01110.1; Parent=AT1G01110; Name=AT1G01110.1; Note=IQ-domain 18; conf_class=1; symbol=IQD18; full_name=IQ-domain 18; computational_description=IQ-domain 18 (IQD18)%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1)%3B Has 1112 Blast hits to 678 proteins in 50 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 109%3B Fungi - 16%3B Plants - 528%3B Viruses - 4%3B Other Eukaryotes - 445 (source: NCBI BLink).; conf_rating=*****; Dbxref=PMID:15703057, PMID:16368012, PMID:17551672, locus:2200945; locus_type=protein_coding COOR W/53022-53183,53484-53624,53703-54494 HITS ES041015 [GenBank] TYPE ESTs EVAL 5e-19 LOCN 1000-Promotor COOR W/52084-52135 HITS ASRP190244 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN 1000-Promotor COOR C/52624-52644 HITS DR293821 [GenBank] TYPE ESTs EVAL e-175 LOCN Exon COOR W/52869-53183,53484-53625 NOTE ES057331 ES055317 ES045982 ES008246 HITS AY085363 [GenBank] TYPE Community cDNA EVAL 97.01 LOCN Exon COOR W/52869-53183,53484-53624,53703-54685 HITS DR293822 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR W/53483-53620,53699-54239 NOTE DR293820 HITS CA781362 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR W/53735-54359 HITS 261580_at [gAtlas] TYPE Affy Probes EVAL 0.0 LOCN Exon COOR W/53904-54462 HITS DR380858 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR W/54101-54692 NOTE EH958716 ES204447 HITS GATCCGGTCTCATAGTG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/54221-54237 NOTE 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 HITS ASRP149119 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN Exon COOR W/54459-54480 HITS GATCTTGACAGTTGATT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR C/54510-54526 NOTE 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 HITS GATCTTTCATCATCCTC [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR W/54523-54539 NOTE 0 15 0 3 0 0 2 0 3 9 0 0 0 4 0 0 0 HITS GATCTGTAACTTCATAA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR W/54646-54662 NOTE 1 44 2 26 5 3 18 9 15 0 2 0 0 2 0 0 0

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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