AtTome: Genome Express Database ( Aug. 2, 2016 )


CODE AT1G01070.1 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [AtGene Express] [AtGDB View] [e-FP Browser] [YE Clone] [AthaMap] [Phosphat] [Methylome]
[Genevestigator] [UToronto BAR Expression Angler] [Araport ] TYPE Gene CHRO chr1 TITL AT1G01070.1 CDS ID=AT1G01070.1; Parent=AT1G01070; Name=AT1G01070.1; Note=nodulin MtN21 /EamA-like transporter family protein; curator_summary=nodulin MtN21-like transporter family protein; conf_class=2; symbol=UMAMIT28; full_name=Usually multiple acids move in and out Transporters 28; computational_description=nodulin MtN21 /EamA-like transporter family protein%3B LOCATED IN: membrane%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6%2C transmembrane (InterPro:IPR000620)%3B BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G11460.1)%3B Has 3211 Blast hits to 3199 proteins in 599 species: Archae - 23%3B Bacteria - 1686%3B Metazoa - 4%3B Fungi - 6%3B Plants - 1233%3B Viruses - 0%3B Other Eukaryotes - 259 (source: NCBI BLink).; conf_rating=****; Dbxref=PMID:15703057, locus:2200990; locus_type=protein_coding COOR C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40877 HITS DR373232 [GenBank] TYPE ESTs EVAL e-172 LOCN Exon COOR C/38752-39056,39138-39284,39408-39602 HITS AY089039 [GenBank] TYPE Community cDNA EVAL 99.92 LOCN Exon COOR C/38753-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40944 HITS BX816186 [GenBank] [Order] TYPE GSLT cDNA EVAL e-117 LOCN Exon COOR C/38790-39057,39139-39285,39408-39816,40215-40330,40474-40537 HITS S68296 [SALK] [About & Citation] [NCBI] [Order from ABRC] TYPE Salk cDNA EVAL 100.00 LOCN Exon COOR C/38815-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40912 NOTE BT015826 HITS U68296 [SALK] [About & Citation] [NCBI] [Order from ABRC] TYPE Salk pUni Clone EVAL 100.00 LOCN Exon COOR C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40877 NOTE BT020209 HITS G68296 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40877 NOTE U68296 BT020209 pENTR_Sfi HITS 261576_at [gAtlas] TYPE Affy Probes EVAL 8e-84 LOCN Exon COOR C/38900-39056,39138-39287,39409-39550 HITS GATCACTAGTGACCATA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/39030-39046 NOTE 6 30 129 20 5 0 0 0 5 17 0 0 0 9 0 3 0 HITS CATGTTGTTGCAAC [About SAGE] TYPE SAGE Target EVAL 100 LOCN Exon COOR W/39247-39260 HITS GATCCAATCATTAACGT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/39448-39464 NOTE 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 HITS DR333276 [GenBank] TYPE ESTs EVAL e-153 LOCN Exon COOR C/39516-39821,40220-40330,40474-40537 HITS BX816126 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR C/40212-40328,40472-40927 HITS DR333275 [GenBank] TYPE ESTs EVAL e-146 LOCN Exon COOR C/40222-40330,40474-40534,40674-40944 NOTE EH960684 EH931186 HITS GATCATTTCGTCAGTGG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/40482-40498 NOTE 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 HITS GATCGAAATAGGAGATA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Intron COOR C/40646-40662 NOTE 1 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0

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