RiceGE: Genome Express Database ( Jan. 16, 2018 )


CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] 
TYPE PFG T-DNA
CHRO chr10
EVAL 10.62
COOR W/7060574-7060658
NOTE Mapping on multiple sites, might not be true.

HITS Os10g12670.1[Seq] [RiceGE7]  [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os10g12670.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/7060004-7060159,7061095-7061860,7062116-7066674 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr09 EVAL 10.62 COOR C/204195-204279 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr09 EVAL 10.62 COOR W/94452-94536 NOTE Mapping on multiple sites, might not be true. HITS Os09g01070.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os09g01070.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/93805-93896,94800-96153,96212-99115 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr09 EVAL 10.62 COOR W/85525-85609 NOTE Mapping on multiple sites, might not be true. HITS Os09g01060.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os09g01060.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/84878-84943,86046-86811,87064-88296,88579-89511,89725-90409,90468-91623 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR W/14868233-14868317 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR W/14846222-14846306 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR W/14837308-14837392 NOTE Mapping on multiple sites, might not be true. HITS Os08g24560.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os08g24560.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/14836663-14836728,14837819-14838584,14838824-14843388 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR C/12511699-12511783 NOTE Mapping on multiple sites, might not be true. HITS Os08g20849.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os08g20849.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/12505706-12510248,12510461-12511266,12512363-12512428 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR C/12502788-12502872 NOTE Mapping on multiple sites, might not be true. HITS Os08g20840.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os08g20840.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass LOCN 300-UTR3 COOR W/12500845-12501000,12501754-12502644 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR C/12225992-12226076 NOTE Mapping on multiple sites, might not be true. HITS Os08g20350.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os08g20350.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/12220009-12224546,12224799-12225564,12226490-12226534 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr08 EVAL 10.62 COOR C/12206470-12206554 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr07 EVAL 10.62 COOR C/23039457-23039541 NOTE Mapping on multiple sites, might not be true. HITS Os07g38340.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os07g38340.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/23033445-23036488,23036771-23038002,23038215-23039020,23039956-23040111 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr04 EVAL 10.62 COOR W/3366740-3366824 NOTE Mapping on multiple sites, might not be true. HITS Os04g06470.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os04g06470.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/3366093-3366158,3367257-3368057,3369008-3369101,3369848-3370554 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr04 EVAL 10.62 COOR C/3330941-3331025 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr04 EVAL 10.62 COOR W/2576282-2576366 NOTE Mapping on multiple sites, might not be true. HITS Os04g05170.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os04g05170.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/2575635-2575700,2576799-2577564,2577662-2577684,2577858-2579786 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr04 EVAL 10.62 COOR W/2567366-2567450 NOTE Mapping on multiple sites, might not be true. HITS Os04g05160.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os04g05160.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/2566719-2566784,2567884-2568649,2568747-2568769,2568943-2573445 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr04 EVAL 10.62 COOR W/1176447-1176531 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr03 EVAL 10.62 COOR C/13497761-13497845 NOTE Mapping on multiple sites, might not be true. HITS Os03g23800.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os03g23800.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/13491756-13496276,13496672-13497331,13498425-13498490 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr03 EVAL 10.62 COOR C/13488848-13488932 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr03 EVAL 10.62 COOR W/13486225-13486309 NOTE Mapping on multiple sites, might not be true. HITS Os03g23790.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os03g23790.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/13485149-13485218,13485455-13485547,13486584-13487035 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr01 EVAL 10.62 COOR C/13744374-13744458 NOTE Mapping on multiple sites, might not be true. HITS Os01g24380.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os01g24380.1 CDS retrotransposon protein, putative, unclassified, expressed LOCN 1000-Promotor COOR C/13742302-13743573 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr01 EVAL 10.62 COOR C/13737341-13737425 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr11 EVAL 10.62 COOR C/6804426-6804510 NOTE Mapping on multiple sites, might not be true. HITS Os11g12200.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os11g12200.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/6799887-6800501,6800951-6804244,6805187-6805339 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr11 EVAL 10.62 COOR C/6813355-6813439 NOTE Mapping on multiple sites, might not be true. HITS Os11g12210.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os11g12210.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/6807337-6811843,6812113-6812918,6813855-6814091 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr12 EVAL 10.62 COOR C/20590978-20591062 NOTE Mapping on multiple sites, might not be true. CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr12 EVAL 10.62 COOR C/20716235-20716319 NOTE Mapping on multiple sites, might not be true. HITS Os12g34160.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os12g34160.1 CDS transposon protein, putative, CACTA, En/Spm sub-class, expressed LOCN 300-UTR3 COOR W/20704920-20705040,20705552-20705610,20706354-20709635,20712362-20713252,20713421-20713663,20713858-20714954,20715064-20715237,20715334-20715444,20715529-20715601,20715696-20715794,20715874-20716035 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chr12 EVAL 10.62 COOR C/20725159-20725243 NOTE Mapping on multiple sites, might not be true. HITS Os12g34180.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os12g34180.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/20719161-20723706,20723919-20724724,20725823-20725888 CLON PFG_4A-50407.R[Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA CHRO chrSy EVAL 10.62 COOR W/428542-428626 NOTE Mapping on multiple sites, might not be true.

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