RiceGE: Genome Express Database ( Jan. 16, 2018 )


CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] 
TYPE TRIM T-DNA
CHRO chr01
EVAL 27.59
COOR C/13744357-13744476
NOTE Mapping on multiple sites, might not be true.

HITS Os01g24380.1[Seq] [RiceGE7]  [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os01g24380.1 CDS retrotransposon protein, putative, unclassified, expressed LOCN 1000-Promotor COOR C/13742302-13743573 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr01 EVAL 27.59 COOR C/13737324-13737443 NOTE Mapping on multiple sites, might not be true. CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr04 EVAL 27.59 COOR W/1176429-1176548 NOTE Mapping on multiple sites, might not be true. CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr04 EVAL 27.59 COOR W/2567348-2567467 NOTE Mapping on multiple sites, might not be true. HITS Os04g05160.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os04g05160.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/2566719-2566784,2567884-2568649,2568747-2568769,2568943-2573445 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr04 EVAL 27.59 COOR W/2576264-2576383 NOTE Mapping on multiple sites, might not be true. HITS Os04g05170.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os04g05170.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/2575635-2575700,2576799-2577564,2577662-2577684,2577858-2579786 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr07 EVAL 27.59 COOR C/23039440-23039559 NOTE Mapping on multiple sites, might not be true. HITS Os07g38340.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os07g38340.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/23033445-23036488,23036771-23038002,23038215-23039020,23039956-23040111 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr08 EVAL 27.59 COOR C/12511682-12511801 NOTE Mapping on multiple sites, might not be true. HITS Os08g20849.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os08g20849.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/12505706-12510248,12510461-12511266,12512363-12512428 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr08 EVAL 27.59 COOR W/14837290-14837409 NOTE Mapping on multiple sites, might not be true. HITS Os08g24560.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os08g24560.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/14836663-14836728,14837819-14838584,14838824-14843388 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr08 EVAL 27.59 COOR W/14846204-14846323 NOTE Mapping on multiple sites, might not be true. CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr10 EVAL 27.59 COOR W/7060556-7060675 NOTE Mapping on multiple sites, might not be true. HITS Os10g12670.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os10g12670.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR W/7060004-7060159,7061095-7061860,7062116-7066674 CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr12 EVAL 27.59 COOR C/20590961-20591080 NOTE Mapping on multiple sites, might not be true. CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr12 EVAL 27.59 COOR C/20716218-20716337 NOTE Mapping on multiple sites, might not be true. CLON M0120729_1[Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA CHRO chr12 EVAL 27.59 COOR C/20725142-20725261 NOTE Mapping on multiple sites, might not be true. HITS Os12g34180.1[Seq] [RiceGE7] [RiceGE7 Text] [RiceGE v6] [About MSU Rice Annotation v 7]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL LOC_Os12g34180.1 CDS retrotransposon protein, putative, Ty3-gypsy subclass, expressed LOCN Intron COOR C/20719161-20723706,20723919-20724724,20725823-20725888

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