RiceGE: Genome Express Database ( Oct. 6, 2010 )


CODE Os01g01150 [Seq] [RiceGE6]  [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01150.1 RNA recognition motif, putative, expressed COOR W/71903-72935,73468-73981,74619-76008 HITS smRNA85364_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN 300-UTR5 COOR W/71591-71614 HITS J013123J12 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.98 LOCN Exon COOR W/71816-72935,73468-73981,74619-76204,76324-76328,76333-77349 HITS J033128C08 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.95 LOCN Exon COOR W/71823-72935,73468-73981,74619-76210,76213-76699 HITS At3g23900 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-141 LOCN Exon COOR W/71915-71948,72009-72040,72065-72227,72459-72596,72634-72652,72737-72799,72811-72840,72913-72963,73502-73581,73582-73601,73728-73803,73926-73956,73957-73970,74017-74042,74617-74662,74617-74677,74641-74732,74711-74742,74758-74802,74791-74861,74908-75003,74939-74963,74966-74985,75040-75066,75046-75092,75504-75533 HITS PFG_1B-21139.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 1e-61 LOCN Exon COOR W/71915-72268 NOTE C10260 2717 Dongjin T-DNA Left Border HITS BT083833 [GenBank] TYPE Maize cDNA EVAL e-170 LOCN Exon COOR W/71931-71951,88832-88882,88864-88895,88974-89019,89015-89026,89133-89179,89148-89182,89301-89360,89362-89447,89393-89481,89712-89765,89715-89777,89751-89900,89760-89808,89888-89916,90110-90136,90117-90129,90137-90233,90160-90225,90169-90192,90189-90215,90220-90237,90229-90256,90280-90332,90365-90419,90370-90398 HITS EU969176 [GenBank] TYPE Maize cDNA EVAL 8e-16 LOCN Exon COOR W/71931-71962,89531-89583,89870-89973 HITS BT055488 [GenBank] TYPE Maize cDNA EVAL e-158 LOCN Exon COOR W/71933-71968,72119-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89421,89700-89832,89730-89753,89951-89974,90093-90214,90162-90179,90191-90234,90265-90282,90348-90372 HITS BT065638 [GenBank] TYPE Maize cDNA EVAL e-158 LOCN Exon COOR W/72115-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89426,89700-89832,89730-89753,89841-89851,90093-90214,90203-90246,90217-90288,90265-90282,90348-90372 HITS EU973605 [GenBank] TYPE Maize cDNA EVAL e-157 LOCN Exon COOR W/72115-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89426,89700-89832,89730-89753,89792-89822,89940-89950,90093-90214,90203-90246,90217-90288,90265-90282,90348-90372 HITS smRNA70008_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN Exon COOR W/72337-72357 HITS SHIP_ZSA126 [Seq] [About SHIP] [Vector] [SHIP Details] [Order] TYPE SHIP T-DNA EVAL 1e-16 LOCN Exon COOR C/73601-73653 HITS SHIP_ZSX0227.B [Seq] [About SHIP] [Vector] [SHIP Details] [Order] TYPE SHIP T-DNA EVAL 1e-16 LOCN Exon COOR C/73601-73653 HITS J033147H07 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.83 LOCN Exon COOR W/74942-76699 HITS GTTCAGAGCGAGGACTC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Exon COOR W/75712-75728 NOTE 0 11 0 0 0 0 CODE Os01g01150 [Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01150.2 RNA recognition motif, putative, expressed COOR W/71903-72935,73468-73981,74619-76008 HITS smRNA85364_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN 300-UTR5 COOR W/71591-71614 HITS J013123J12 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.98 LOCN Exon COOR W/71816-72935,73468-73981,74619-76204,76324-76328,76333-77349 HITS J033128C08 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.95 LOCN Exon COOR W/71823-72935,73468-73981,74619-76210,76213-76699 HITS At3g23900 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-141 LOCN Exon COOR W/71915-71948,72009-72040,72065-72227,72459-72596,72634-72652,72737-72799,72811-72840,72913-72963,73502-73581,73582-73601,73728-73803,73926-73956,73957-73970,74017-74042,74617-74662,74617-74677,74641-74732,74711-74742,74758-74802,74791-74861,74908-75003,74939-74963,74966-74985,75040-75066,75046-75092,75504-75533 HITS PFG_1B-21139.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 1e-61 LOCN Exon COOR W/71915-72268 NOTE C10260 2717 Dongjin T-DNA Left Border HITS BT083833 [GenBank] TYPE Maize cDNA EVAL e-170 LOCN Exon COOR W/71931-71951,88832-88882,88864-88895,88974-89019,89015-89026,89133-89179,89148-89182,89301-89360,89362-89447,89393-89481,89712-89765,89715-89777,89751-89900,89760-89808,89888-89916,90110-90136,90117-90129,90137-90233,90160-90225,90169-90192,90189-90215,90220-90237,90229-90256,90280-90332,90365-90419,90370-90398 HITS EU969176 [GenBank] TYPE Maize cDNA EVAL 8e-16 LOCN Exon COOR W/71931-71962,89531-89583,89870-89973 HITS BT055488 [GenBank] TYPE Maize cDNA EVAL e-158 LOCN Exon COOR W/71933-71968,72119-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89421,89700-89832,89730-89753,89951-89974,90093-90214,90162-90179,90191-90234,90265-90282,90348-90372 HITS BT065638 [GenBank] TYPE Maize cDNA EVAL e-158 LOCN Exon COOR W/72115-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89426,89700-89832,89730-89753,89841-89851,90093-90214,90203-90246,90217-90288,90265-90282,90348-90372 HITS EU973605 [GenBank] TYPE Maize cDNA EVAL e-157 LOCN Exon COOR W/72115-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89426,89700-89832,89730-89753,89792-89822,89940-89950,90093-90214,90203-90246,90217-90288,90265-90282,90348-90372 HITS smRNA70008_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN Exon COOR W/72337-72357 HITS SHIP_ZSA126 [Seq] [About SHIP] [Vector] [SHIP Details] [Order] TYPE SHIP T-DNA EVAL 1e-16 LOCN Exon COOR C/73601-73653 HITS SHIP_ZSX0227.B [Seq] [About SHIP] [Vector] [SHIP Details] [Order] TYPE SHIP T-DNA EVAL 1e-16 LOCN Exon COOR C/73601-73653 HITS J033147H07 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.83 LOCN Exon COOR W/74942-76699 HITS GTTCAGAGCGAGGACTC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Exon COOR W/75712-75728 NOTE 0 11 0 0 0 0 CODE Os01g01150 [Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01150.3 RNA recognition motif, putative, expressed COOR W/71903-72935,73468-73981,74619-76008 HITS smRNA85364_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN 300-UTR5 COOR W/71591-71614 HITS J013123J12 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.98 LOCN Exon COOR W/71816-72935,73468-73981,74619-76204,76324-76328,76333-77349 HITS J033128C08 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.95 LOCN Exon COOR W/71823-72935,73468-73981,74619-76210,76213-76699 HITS At3g23900 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-141 LOCN Exon COOR W/71915-71948,72009-72040,72065-72227,72459-72596,72634-72652,72737-72799,72811-72840,72913-72963,73502-73581,73582-73601,73728-73803,73926-73956,73957-73970,74017-74042,74617-74662,74617-74677,74641-74732,74711-74742,74758-74802,74791-74861,74908-75003,74939-74963,74966-74985,75040-75066,75046-75092,75504-75533 HITS PFG_1B-21139.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 1e-61 LOCN Exon COOR W/71915-72268 NOTE C10260 2717 Dongjin T-DNA Left Border HITS BT083833 [GenBank] TYPE Maize cDNA EVAL e-170 LOCN Exon COOR W/71931-71951,88832-88882,88864-88895,88974-89019,89015-89026,89133-89179,89148-89182,89301-89360,89362-89447,89393-89481,89712-89765,89715-89777,89751-89900,89760-89808,89888-89916,90110-90136,90117-90129,90137-90233,90160-90225,90169-90192,90189-90215,90220-90237,90229-90256,90280-90332,90365-90419,90370-90398 HITS EU969176 [GenBank] TYPE Maize cDNA EVAL 8e-16 LOCN Exon COOR W/71931-71962,89531-89583,89870-89973 HITS BT055488 [GenBank] TYPE Maize cDNA EVAL e-158 LOCN Exon COOR W/71933-71968,72119-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89421,89700-89832,89730-89753,89951-89974,90093-90214,90162-90179,90191-90234,90265-90282,90348-90372 HITS BT065638 [GenBank] TYPE Maize cDNA EVAL e-158 LOCN Exon COOR W/72115-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89426,89700-89832,89730-89753,89841-89851,90093-90214,90203-90246,90217-90288,90265-90282,90348-90372 HITS EU973605 [GenBank] TYPE Maize cDNA EVAL e-157 LOCN Exon COOR W/72115-72139,88847-88891,88977-89020,89130-89172,89162-89188,89307-89367,89357-89426,89700-89832,89730-89753,89792-89822,89940-89950,90093-90214,90203-90246,90217-90288,90265-90282,90348-90372 HITS smRNA70008_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN Exon COOR W/72337-72357 HITS SHIP_ZSA126 [Seq] [About SHIP] [Vector] [SHIP Details] [Order] TYPE SHIP T-DNA EVAL 1e-16 LOCN Exon COOR C/73601-73653 HITS SHIP_ZSX0227.B [Seq] [About SHIP] [Vector] [SHIP Details] [Order] TYPE SHIP T-DNA EVAL 1e-16 LOCN Exon COOR C/73601-73653 HITS J033147H07 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.83 LOCN Exon COOR W/74942-76699 HITS GTTCAGAGCGAGGACTC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Exon COOR W/75712-75728 NOTE 0 11 0 0 0 0

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