RiceGE: Genome Express Database ( Oct. 6, 2010 )


CODE Os01g01130 [Seq] [RiceGE6]  [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01130.1 snurportin-1, putative, expressed COOR C/62670-62783,62877-63020,63339-63431,63665-63779,63902-64152,64248-64431,64628-64950 HITS J043016L21 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 100.00 LOCN Exon COOR C/62350-62783,62877-63020,63339-63431,63665-63779,63902-64152,64248-64431,64628-65302 HITS At4g24880 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-114 LOCN Exon COOR W/62792-62829,62897-62922,63023-63072,63376-63394,63657-63699,63781-63820,63933-63983,63989-64040,64182-64275,64200-64229,64312-64349,64430-64472,64728-64768,64783-64838,64950-65025 HITS PFG_4A-00511.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN Exon COOR C/63340-63725 NOTE A40432 2715 Dongjin T-DNA Right Border HITS PFG_4A-00506.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN Exon COOR C/63352-63979 NOTE A40425 2715 Dongjin T-DNA Right Border HITS BT086877 [GenBank] TYPE Maize cDNA EVAL 4e-62 LOCN Exon COOR C/63963-64010,63985-63997,64119-64171,64126-64140,64221-64243,64370-64430,64587-64606,64686-64725 HITS PFG_4A-00506.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 1e-74 LOCN Exon COOR W/64009-64158 NOTE A40424 2715 Dongjin T-DNA Left Border HITS BT086858 [GenBank] TYPE Maize cDNA EVAL 5e-42 LOCN Exon COOR C/64234-64283,64240-64261,64374-64430,64577-64601,64686-64725 HITS M0083838_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 1.1e-141 LOCN Intron COOR C/64329-64591 HITS M0083838_2 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 9.9e-202 LOCN Exon COOR C/64329-64696 HITS smRNA28862_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN 1000-Promotor COOR C/65403-65426 HITS CTTTAGACCATGTCATC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65519-65535 NOTE 0 0 0 0 0 4 HITS CATGTCATCTCGTCGCG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65527-65543 NOTE 0 0 3 0 0 0 HITS GTCATCTCGTCGCGTCA [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65530-65546 NOTE 0 0 2 0 0 0 HITS CGCGTCAGGCCCTCTGC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65540-65556 NOTE 0 0 0 1 0 0 HITS AGGCCCTCTGCGGAGCA [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65546-65562 NOTE 0 0 0 1 0 0 HITS CGAGCAAGGAGCCGCCG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65580-65596 NOTE 0 0 1 0 0 0 HITS GGCTGCGAGGCACAGTG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR C/65606-65622 NOTE 0 0 2 0 0 0 HITS CCTCGCAGCCATCGCAT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65613-65629 NOTE 0 0 1 0 0 0 HITS smRNA91000_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN 1000-Promotor COOR C/65637-65660 HITS ACTGCTTGCGAGGTGCG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR C/65684-65700 NOTE 1 0 0 0 0 0 HITS GCGACTGCTTGCGAGGT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR C/65687-65703 NOTE 0 0 1 0 0 0 HITS CGCGGTCGAGCCACCCG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65751-65767 NOTE 0 0 6 0 0 0 HITS CTCACGGGTGGCTCGAC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR C/65755-65771 NOTE 0 0 1 0 0 0 HITS CGGAGACGGAGCTGGTG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/65819-65835 NOTE 0 0 1 0 0 0

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