RiceGE: Genome Express Database ( Oct. 6, 2010 )


CODE Os01g01110 [Seq] [RiceGE6]  [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01110.1 conserved hypothetical protein COOR W/54914-54918,56084-56972 HITS PFG_2C-30054.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL e-162 LOCN 1000-Promotor COOR W/54204-54547 NOTE C13014 2717 Dongjin T-DNA Left Border HITS CGAGCAAGACATGCATG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR W/54216-54232 NOTE 5 0 0 0 0 0 HITS TTTTCTGGACTCTATAA [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55117-55133 NOTE 0 3 0 0 0 0 HITS AAAGCTGGATTGTTTAG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55159-55175 NOTE 2 0 0 0 0 0 HITS CACAAGGTTTCACATAG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55679-55695 NOTE 0 1 0 0 0 0 HITS AAGGTTTCACATAGGTC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55682-55698 NOTE 3 0 0 0 0 0 HITS GGACCTATGTGAAACCT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR C/55683-55699 NOTE 0 0 0 3 0 0 HITS TGGACCTATGTGAAACC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR C/55684-55700 NOTE 0 1 0 0 0 0 HITS smRNA119343_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN Intron COOR C/55686-55709 HITS AGATCGTGGACCTATGT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR C/55690-55706 NOTE 0 1 0 0 0 0 HITS GAACGCTTTGCAAGATC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR C/55702-55718 NOTE 0 7 0 0 0 2 HITS smRNA86240_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN Intron COOR C/55706-55729 HITS AAAGCGTTCATCAAGGT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55710-55726 NOTE 0 0 0 1 0 0 HITS smRNA107992_1x [Seq] [About CSRDB smallRNA] TYPE smRNA CSRDB EVAL 100.00 LOCN Intron COOR C/55716-55739 HITS TTCTGGTCCAAAGCGTC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55751-55767 NOTE 0 0 0 0 0 1 HITS CTGGTCCAAAGCGTCGT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55753-55769 NOTE 0 0 2 0 0 0 HITS TGGTCCAAAGCGTCGTT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR W/55754-55770 NOTE 0 2 0 0 0 0 HITS ATATCATCGTCTACGTG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Intron COOR C/55799-55815 NOTE 0 0 0 0 0 3 HITS PFG_2C-60242.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 9e-54 LOCN Exon COOR W/56157-56297 NOTE C15056 2717 Dongjin T-DNA Right Border HITS PFG_2C-60242.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 4e-99 LOCN Exon COOR W/56349-56628 NOTE C15056 2717 Dongjin T-DNA Right Border HITS PFG_2C-60242.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL e-102 LOCN Exon COOR C/56422-56628 NOTE C15057 2717 Dongjin T-DNA Left Border HITS At5g53850 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL 1e-66 LOCN Exon COOR W/56627-56644,61391-61429,61470-61495,61508-61541,61583-61651,61757-61772,61782-61848,61856-61872,62000-62038,62136-62153,62235-62268,62326-62354 HITS ACGACGGCGACCCTGCG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Exon COOR C/56643-56659 NOTE 0 0 2 0 0 0 HITS M0036739 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 0.0 LOCN Exon COOR W/56914-57442 HITS TCTTCCTCGACGACGGC [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Exon COOR W/56922-56938 NOTE 0 0 3 0 0 0 HITS CGCCGTCGTCGAGGAAG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN Exon COOR C/56923-56939 NOTE 0 0 2 0 0 0 HITS ATCTTATTTGACCGTGG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 300-UTR3 COOR C/57025-57041 NOTE 5 0 0 0 0 0 HITS AAATCTTATTTGACCGT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 300-UTR3 COOR C/57027-57043 NOTE 0 15 0 1 0 0 HITS GGATTTAGATGAAACAT [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 300-UTR3 COOR W/57105-57121 NOTE 0 0 0 0 1 0

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