RiceGE: Genome Express Database ( Oct. 6, 2010 )


CODE Os01g01080 [Seq] [RiceGE6]  [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01080.2 decarboxylase, putative, expressed COOR W/35876-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS EU152208 [GenBank] TYPE Community cDNA EVAL 99.22 LOCN Exon COOR W/34742-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39602,39703-39781,39885-40168 HITS AY972084 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR W/34743-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS At1g27980 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-177 LOCN Exon COOR W/34767-34824,35025-35041,35514-35567,35690-35722,35819-35838,36595-36669,36670-36681,36868-36897,36893-36940,37276-37292,37416-37453,38320-38361,38929-38968,38976-38999,39065-39083,39134-39152,39457-39504,39509-39523,39629-39648,39701-39728,39885-39922,39994-40034 HITS OSIGCSA015E01 [GenBank] [About RiCD] [RiCD Search] [Order from NCGR, China] TYPE RiCD FL-cDNA EVAL 75.15 LOCN 1000-Promotor COOR W/34885-35258,35252-35401 HITS PFG_2C-30280.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 6e-24 LOCN 1000-Promotor COOR W/35429-35534 NOTE C13286 2717 Dongjin T-DNA Left Border HITS M0072621_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 7.8e-08 LOCN Exon COOR C/36924-36952,36950-37277 HITS PFG_K-01409.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 3e-78 LOCN Exon COOR W/38344-38491 NOTE E02525 2715 Kitaake T-DNA Right Border HITS PFG_K-01409.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 7e-76 LOCN Exon COOR W/38344-38490 NOTE E02525 2715 Kitaake T-DNA Right Border HITS OSIGCSA021E03 [GenBank] [About RiCD] [RiCD Search] [Order from NCGR, China] TYPE RiCD FL-cDNA EVAL 59.74 LOCN Exon COOR W/39700-39781,39885-40177 HITS PFG_2C-00059.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN Exon COOR W/39973-40752 NOTE C11154 2717 Dongjin T-DNA Left Border CODE Os01g01080 [Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01080.1 decarboxylase, putative, expressed COOR W/34743-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS M0061850_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 0.0e+00 LOCN 1000-Promotor COOR C/33291-33933 HITS RMD_04Z11GN52 [Seq] [About RMD] [Trait] [iSect Primer] [Request] TYPE RMD T-DNA EVAL 0.0 LOCN 1000-Promotor COOR C/33330-33772 HITS RMD_TTL-04Z11GN52_NTLB5 [Seq] [About RMD] [Trait] [iSect Primer] [Request] TYPE RMD T-DNA EVAL 0.0 LOCN 1000-Promotor COOR C/33330-33772 HITS DAG3B06 [Seq] [GenBank] [About Genoplante Rice Tag Line] [iSect Primer] TYPE Genoplante T-DNA EVAL 4e-47 LOCN 1000-Promotor COOR C/33713-33807 HITS PFG_3A-52877.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN 1000-Promotor COOR W/33913-34568 NOTE A38011 2715 Dongjin T-DNA Left Border HITS CCTCTTATATCAGGGGA [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 1000-Promotor COOR C/34259-34275 NOTE 0 0 0 0 0 1 HITS CTAATACTCTCTCTCCG [Seq] [About MPSS smallRNA]
Note : STM SNU FLR SNM ABA UNT TYPE smRNA MPSS EVAL 100.00 LOCN 300-UTR5 COOR C/34464-34480 NOTE 2 0 0 0 0 0 HITS M0026841_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 2.9e-309 LOCN 300-UTR5 COOR W/34608-35167 HITS J100082C01 [GenBank] [About KOME] [Order from RGRC] [Microarray] TYPE KOME FL-cDNA EVAL 99.95 LOCN Exon COOR W/34623-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40136 HITS M0028179_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 6.3e-104 LOCN 300-UTR5 COOR W/34676-34872 HITS M0124003_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 7.8e-163 LOCN 300-UTR5 COOR W/34728-35027 HITS EU152208 [GenBank] TYPE Community cDNA EVAL 99.22 LOCN Exon COOR W/34742-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39602,39703-39781,39885-40168 HITS AY972084 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR W/34743-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS PFG_2D-10116.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN Exon COOR W/34759-35445 NOTE D02507 2772 Dongjin T-DNA Left Border HITS At1g27980 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-177 LOCN Exon COOR W/34767-34824,35025-35041,35514-35567,35690-35722,35819-35838,36595-36669,36670-36681,36868-36897,36893-36940,37276-37292,37416-37453,38320-38361,38929-38968,38976-38999,39065-39083,39134-39152,39457-39504,39509-39523,39629-39648,39701-39728,39885-39922,39994-40034 HITS OSIGCSA015E01 [GenBank] [About RiCD] [RiCD Search] [Order from NCGR, China] TYPE RiCD FL-cDNA EVAL 75.15 LOCN Exon COOR W/34885-35258,35252-35401 HITS PFG_2C-30280.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 6e-24 LOCN Intron COOR W/35429-35534 NOTE C13286 2717 Dongjin T-DNA Left Border HITS M0072621_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 7.8e-08 LOCN Exon COOR C/36924-36952,36950-37277 HITS PFG_K-01409.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 3e-78 LOCN Exon COOR W/38344-38491 NOTE E02525 2715 Kitaake T-DNA Right Border HITS PFG_K-01409.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 7e-76 LOCN Exon COOR W/38344-38490 NOTE E02525 2715 Kitaake T-DNA Right Border HITS OSIGCSA021E03 [GenBank] [About RiCD] [RiCD Search] [Order from NCGR, China] TYPE RiCD FL-cDNA EVAL 59.74 LOCN Exon COOR W/39700-39781,39885-40177 HITS PFG_2C-00059.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN Exon COOR W/39973-40752 NOTE C11154 2717 Dongjin T-DNA Left Border CODE Os01g01080 [Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene CHRO chr01 TITL Os01g01080.3 decarboxylase, putative, expressed COOR W/35876-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS EU152208 [GenBank] TYPE Community cDNA EVAL 99.22 LOCN Exon COOR W/34742-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39602,39703-39781,39885-40168 HITS AY972084 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR W/34743-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS At1g27980 [T-DNA Express] [Transcriptome] [T-DNA Express Text] TYPE Arabidopsis cDNA EVAL e-177 LOCN Exon COOR W/34767-34824,35025-35041,35514-35567,35690-35722,35819-35838,36595-36669,36670-36681,36868-36897,36893-36940,37276-37292,37416-37453,38320-38361,38929-38968,38976-38999,39065-39083,39134-39152,39457-39504,39509-39523,39629-39648,39701-39728,39885-39922,39994-40034 HITS OSIGCSA015E01 [GenBank] [About RiCD] [RiCD Search] [Order from NCGR, China] TYPE RiCD FL-cDNA EVAL 75.15 LOCN 1000-Promotor COOR W/34885-35258,35252-35401 HITS PFG_2C-30280.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 6e-24 LOCN 1000-Promotor COOR W/35429-35534 NOTE C13286 2717 Dongjin T-DNA Left Border HITS M0072621_1 [Seq] [About TRIM FST] [GenBank] [iSect Primer] [Order or Feedback] TYPE TRIM T-DNA EVAL 7.8e-08 LOCN Exon COOR C/36924-36952,36950-37277 HITS PFG_K-01409.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 3e-78 LOCN Exon COOR W/38344-38491 NOTE E02525 2715 Kitaake T-DNA Right Border HITS PFG_K-01409.R [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 7e-76 LOCN Exon COOR W/38344-38490 NOTE E02525 2715 Kitaake T-DNA Right Border HITS OSIGCSA021E03 [GenBank] [About RiCD] [RiCD Search] [Order from NCGR, China] TYPE RiCD FL-cDNA EVAL 59.74 LOCN Exon COOR W/39700-39781,39885-40177 HITS PFG_2C-00059.L [Seq] [About PFG] [Paper] [Vector] [iSect Primer] [Order/Request] [RAP-DB] TYPE PFG T-DNA EVAL 0.0 LOCN Exon COOR W/39973-40752 NOTE C11154 2717 Dongjin T-DNA Left Border

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