RiceGE: Genome Express Database ( Jan. 16, 2018 )


CLON At5g54780[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr02
EVAL 1e-55
COOR W/34649135-34649167,34649752-34649777,34649870-34649905,34650080-34650100,34650277-34650319,34650547-34650580,34650630-34650657

HITS Os02g56570[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12002.m10679 (update, updateIDs: 10920, (gene: 12002.t05229, model: 12002.m10679)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12002.m10679.) ;
LOCN Exon
COOR W/34648635-34648760,34649138-34649233,34649764-34649867,34649941-34650140,34650281-34650403,34650548-34650636,34651582-34651687,34651811-34651908,34652117-34652362,34652464-34652547,34652649-34652660

CLON At5g54780[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr01
EVAL 1e-34
COOR W/4710-4723,4832-4873,5033-5062,5240-5297

HITS Os01g01010[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed (PASA (rice_release4_08302005) ALT-SPLICE: Added alt splice isoform to 12001.t00001 = 12001.m42814); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12001.m06748.) ;
LOCN Exon
COOR W/251-418,1159-1257,2259-2362,3938-4746,4830-4952,5034-5122,5210-5410,6012-6113,6906-6989,7034-7046,7306-7364

CLON At5g54780[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr02
EVAL 1e-63
COOR W/34650008-34650023,34650080-34650100,34650277-34650319,34650547-34650580,34651582-34651626,34651810-34651843,34651913-34651947,34652102-34652118,34652207-34652234,34652261-34652295,34652380-34652390,34652461-34652480

HITS Os02g56570[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12002.m10679 (update, updateIDs: 10920, (gene: 12002.t05229, model: 12002.m10679)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12002.m10679.) ;
LOCN Exon
COOR W/34648635-34648760,34649138-34649233,34649764-34649867,34649941-34650140,34650281-34650403,34650548-34650636,34651582-34651687,34651811-34651908,34652117-34652362,34652464-34652547,34652649-34652660

CLON At5g54780[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr07
EVAL e-121
COOR W/20409211-20409229,20412627-20412657,20412689-20412709,20412851-20412874,20414121-20414170,20414269-20414321,20414457-20414499,20414613-20414626,20414663-20414692,20414901-20414935,20414992-20415005,20415095-20415128,20415192-20415224,20415734-20415780,20415861-20415903,20416283-20416314

HITS Os07g34130[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12007.m07671 (update, updateIDs: 38510, (gene: 12007.t03090, model: 12007.m07671)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12007.m07671.) ;
LOCN Exon
COOR W/20409193-20409297,20412624-20412719,20412851-20412954,20414114-20414373,20414461-20414583,20414664-20414752,20414901-20415006,20415096-20415193,20415602-20415871,20416195-20416278,20416464-20416484

CLON At5g54780[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr11
EVAL e-117
COOR W/21766520-21766549,21766592-21766609,21766761-21766792,21766855-21766889,21766927-21766948,21766971-21766992,21767208-21767240,21767305-21767338,21767417-21767430,21767508-21767542,21767673-21767702,21767788-21767800,21767883-21767924,21768034-21768049,21768120-21768174,21768134-21768147,21768241-21768281,21768884-21768907,21769574-21769613

HITS Os11g37690[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12011.m07614 (update, updateIDs: 55584, (gene: 12011.t03309, model: 12011.m07614)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12011.m07614.) ;
LOCN Exon
COOR C/21766388-21766408,21766525-21766608,21766754-21767017,21767207-21767304,21767403-21767508,21767584-21767672,21767760-21767882,21767989-21768248,21768781-21768884,21769455-21769550,21769773-21769871



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