RiceGE: Genome Express Database ( Jan. 16, 2018 )


CLON At4g28550[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr02
EVAL 1e-76
COOR W/34650002-34650048,34650271-34650315,34650547-34650584,34650682-34650696,34651582-34651626,34651810-34651843,34652102-34652189,34652358-34652411,34652552-34652581

HITS Os02g56570[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12002.m10679 (update, updateIDs: 10920, (gene: 12002.t05229, model: 12002.m10679)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12002.m10679.) ;
LOCN Exon
COOR W/34648635-34648760,34649138-34649233,34649764-34649867,34649941-34650140,34650281-34650403,34650548-34650636,34651582-34651687,34651811-34651908,34652117-34652362,34652464-34652547,34652649-34652660

CLON At4g28550[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr02
EVAL 1e-54
COOR W/34648704-34648722,34649141-34649171,34649261-34649274,34649752-34649790,34649837-34649861,34649939-34650006,34650042-34650073,34650271-34650315,34650547-34650584,34650659-34650696

HITS Os02g56570[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12002.m10679 (update, updateIDs: 10920, (gene: 12002.t05229, model: 12002.m10679)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12002.m10679.) ;
LOCN Exon
COOR W/34648635-34648760,34649138-34649233,34649764-34649867,34649941-34650140,34650281-34650403,34650548-34650636,34651582-34651687,34651811-34651908,34652117-34652362,34652464-34652547,34652649-34652660

CLON At4g28550[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr01
EVAL 4e-34
COOR W/2244-2283,4832-4873,5033-5062,5240-5297

HITS Os01g01010[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed (PASA (rice_release4_08302005) ALT-SPLICE: Added alt splice isoform to 12001.t00001 = 12001.m42814); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12001.m06748.) ;
LOCN Exon
COOR W/251-418,1159-1257,2259-2362,3938-4746,4830-4952,5034-5122,5210-5410,6012-6113,6906-6989,7034-7046,7306-7364

CLON At4g28550[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr07
EVAL 2e-95
COOR W/20409214-20409239,20412621-20412653,20412851-20412885,20412927-20412952,20414112-20414152,20414233-20414272,20414457-20414499,20414613-20414626,20414663-20414692,20414886-20414925,20415095-20415128,20415195-20415218,20415785-20415814,20416186-20416219,20416286-20416310

HITS Os07g34130[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12007.m07671 (update, updateIDs: 38510, (gene: 12007.t03090, model: 12007.m07671)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12007.m07671.) ;
LOCN Exon
COOR W/20409193-20409297,20412624-20412719,20412851-20412954,20414114-20414373,20414461-20414583,20414664-20414752,20414901-20415006,20415096-20415193,20415602-20415871,20416195-20416278,20416464-20416484

CLON At4g28550[T-DNA Express] [Transcriptome] [T-DNA Express Text] 
TYPE Arabidopsis CDS
CHRO chr11
EVAL 1e-99
COOR W/21766514-21766539,21766611-21766644,21766780-21766802,21766912-21766965,21767020-21767036,21767200-21767222,21767305-21767338,21767508-21767542,21767673-21767702,21767786-21767802,21767883-21767924,21768129-21768167,21768250-21768290,21768805-21768827,21768884-21768918,21769574-21769613,21769850-21769873

HITS Os11g37690[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12011.m07614 (update, updateIDs: 55584, (gene: 12011.t03309, model: 12011.m07614)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12011.m07614.) ;
LOCN Exon
COOR C/21766388-21766408,21766525-21766608,21766754-21767017,21767207-21767304,21767403-21767508,21767584-21767672,21767760-21767882,21767989-21768248,21768781-21768884,21769455-21769550,21769773-21769871



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