RiceGE: Genome Express Database ( Jan. 16, 2018 )


CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr05
EVAL 7e-85
COOR W/23800616-23800678,23800801-23800886,23801509-23801556,23801664-23801698,23801824-23801880,23801904-23801967,23802094-23802167,23802204-23802282,23802439-23802542
NOTE ZM_BFc0155H04

HITS Os05g40740[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL pollen-specific protein NTP303 precursor, putative, expressed (PASA (rice_osa1r5_gmapsim4_05232006) ALT-SPLICE: Added alt splice isoform to 12005.t03613 = 12005.m083763); (PASA (rice_osa1r5_gmapsim4_05232006) ALT-SPLICE: Added alt splice isoform to 12005.t03613 = 12005.m083762); (PASA (rice_osa1r5_gm
LOCN Exon
COOR C/23800499-23800592,23800659-23800802,23801367-23802733
HITS Os05g40740[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL pollen-specific protein NTP303 precursor, putative, expressed (PASA (rice_osa1r5_gmapsim4_05232006) ALT-SPLICE: Added alt splice isoform to 12005.t03613 = 12005.m083763); (PASA (rice_osa1r5_gmapsim4_05232006) ALT-SPLICE: Added alt splice isoform to 12005.t03613 = 12005.m083762); (PASA (rice_osa1r5_gm
LOCN Exon
COOR C/23800499-23800802,23801367-23802733

CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr04
EVAL 2e-77
COOR W/27908233-27908294,27908420-27908480,27908602-27908628,27908715-27908726,27908836-27908894,27908956-27908988,27909064-27909105,27909342-27909398,27909511-27909570,27909524-27909536,27909766-27909796,27909816-27909894,27909937-27909975,27910051-27910129
NOTE ZM_BFc0155H04

HITS Os04g47400[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL pollen-specific protein NTP303 precursor, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12004.m09685 (update, updateIDs: 23997, (gene: 12004.t04266, model: 12004.m09685)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12004.m09685.) ;
LOCN Exon
COOR C/27908190-27908417,27908525-27908603,27908688-27909062,27909162-27909510,27909628-27909730,27909812-27910082,27910736-27910845,27910958-27911107

CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr01
EVAL e-161
COOR W/9873-9937,9987-10025,10068-10204,10308-10333,10337-10391,10452-10484,10479-10524,10682-10767,10768-10780,10911-10936,10952-10992,11162-11188,11248-11267,11799-11810,11913-11960
NOTE ZM_BFc0155H04

HITS Os01g01030[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL monocopper oxidase precursor, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12001.m06750 (update, updateIDs: 2, (gene: 12001.t00003, model: 12001.m06750)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12001.m06750.) ; (PASA (r
LOCN Exon
COOR W/9576-10615,10708-11073,11161-11239,11771-11973,12068-12161

CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr06
EVAL e-176
COOR W/296903-296931,296973-296996,296998-297018,297105-297148,297449-297461,297512-297537,297642-297685,297674-297711,297685-297695,297879-297958,298669-298712,298703-298740,298750-298784,298878-298892,298957-299079,299373-299420,299577-299618,299700-299778
NOTE ZM_BFc0155H04

HITS Os06g01490[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL monocopper oxidase precursor, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12006.m04887 (update, updateIDs: 32884, (gene: 12006.t00047, model: 12006.m04887)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12006.m04887.) ;
LOCN Exon
COOR C/296681-296789,296903-297105,297348-297426,297512-297877,298590-298956,299235-299373,299461-299731,299849-299958,300567-300704

CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr07
EVAL 1e-85
COOR W/1054207-1054295,1054315-1054351,1054546-1054609,1054652-1054687,1054879-1054928,1055011-1055057,1055137-1055181,1055915-1055975,1062573-1062593,1062871-1062883
NOTE ZM_BFc0155H04

HITS Os07g02810[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL L-ascorbate oxidase homolog precursor, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12007.m04753 (update, updateIDs: 37666, (gene: 12007.t00172, model: 12007.m04753)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12007.m04753.) ;
LOCN Exon
COOR W/1053794-1053943,1054066-1055270,1055401-1055479,1055918-1056121
HITS Os07g02820[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL expressed protein PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12007.m04754 (update, updateIDs: 39380, (gene: 12007.t00173, model: 12007.m04754));
LOCN Exon
COOR C/1059647-1059875,1060250-1060368,1060564-1060707
HITS Os07g02840[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL pectinesterase, putative
LOCN Exon
COOR W/1062506-1062619,1062713-1062849,1063982-1064009

CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr08
EVAL 0.0
COOR W/3114142-3114169,3114246-3114280,3114363-3114381,3114377-3114409,3114505-3114539,3114542-3114608,3114567-3114590,3114730-3114756,3114871-3114881,3114974-3115017,3115006-3115043,3115211-3115290,3115420-3115433,3115538-3115582,3115576-3115602,3115697-3115722,3115774-3115850,3116593-3116640,3117074-3117115,3117197-3117276
NOTE ZM_BFc0155H04

HITS Os08g05820[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL monocopper oxidase-like protein SKS1 precursor, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12008.m04723 (update, updateIDs: 43890, (gene: 12008.t00474, model: 12008.m04723)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12008.m04723.) ;
LOCN Exon
COOR C/3114133-3114244,3114343-3114542,3114653-3114731,3114844-3115209,3115557-3115773,3116455-3116593,3116958-3117228,3117986-3118095,3118967-3119122

CLON BT064280[GenBank] 
TYPE Maize cDNA
CHRO chr10
EVAL e-146
COOR W/19120558-19120647,19120675-19120714,19120793-19120871,19121893-19121992,19121993-19122013,19122097-19122135,19122164-19122192,19122186-19122210,19122878-19122955,19123083-19123129,19123124-19123164,19123540-19123566,19124184-19124226,19124325-19124346
NOTE ZM_BFc0155H04

HITS Os10g36390[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL monocopper oxidase precursor, putative
LOCN Exon
COOR W/19120091-19120267,19120346-19120455,19120527-19120797,19120893-19121031,19121900-19122120,19122213-19122259,19122880-19123245,19123539-19123617,19124187-19124380,19124795-19124912



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