RiceGE: Genome Express Database ( Jan. 16, 2018 )


CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr01
EVAL 7e-33
COOR W/4832-4873,5033-5062,5240-5313
NOTE ZM_BFb0115B11

HITS Os01g01010[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed (PASA (rice_release4_08302005) ALT-SPLICE: Added alt splice isoform to 12001.t00001 = 12001.m42814); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12001.m06748.) ;
LOCN Exon
COOR W/251-418,1159-1257,2259-2362,3938-4746,4830-4952,5034-5122,5210-5410,6012-6113,6906-6989,7034-7046,7306-7364

CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr02
EVAL e-143
COOR W/34648641-34648680,34649135-34649167,34649764-34649789,34649838-34649860,34649870-34649886,34649960-34650006,34650007-34650027,34650057-34650096,34650277-34650319,34650547-34650580,34650672-34650684,34651581-34651616,34651721-34651734,34651810-34651843,34652102-34652189,34652240-34652280,34652391-34652447,34652461-34652491,34652549-34652577
NOTE ZM_BFb0115B11

HITS Os02g56570[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12002.m10679 (update, updateIDs: 10920, (gene: 12002.t05229, model: 12002.m10679)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12002.m10679.) ;
LOCN Exon
COOR W/34648635-34648760,34649138-34649233,34649764-34649867,34649941-34650140,34650281-34650403,34650548-34650636,34651582-34651687,34651811-34651908,34652117-34652362,34652464-34652547,34652649-34652660

CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr07
EVAL 1e-71
COOR W/20409232-20409251,20412627-20412657,20412851-20412876,20412924-20412948,20414133-20414164,20414227-20414265,20414334-20414348,20414457-20414499,20414613-20414626,20414663-20414692,20414901-20414935,20415095-20415128,20415195-20415228,20415740-20415784,20416186-20416219,20416280-20416310
NOTE ZM_BFb0115B11

HITS Os07g34130[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12007.m07671 (update, updateIDs: 38510, (gene: 12007.t03090, model: 12007.m07671)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12007.m07671.) ;
LOCN Exon
COOR W/20409193-20409297,20412624-20412719,20412851-20412954,20414114-20414373,20414461-20414583,20414664-20414752,20414901-20415006,20415096-20415193,20415602-20415871,20416195-20416278,20416464-20416484

CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr08
EVAL 5e-31
COOR W/27280087-27280148,27280264-27280325
NOTE ZM_BFb0115B11

HITS Os08g43380[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL GTPase activator protein of Rab-like small GTPases-like protein, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12008.m08312 (update, updateIDs: 43462, (gene: 12008.t04063, model: 12008.m08312)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12008.m08312.) ;
LOCN Exon
COOR W/27276322-27276557,27277246-27277381,27277518-27277567,27278840-27278893,27279483-27280704

CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr09
EVAL 3e-30
COOR W/20716533-20716574,20716715-20716776,20716726-20716742,20716892-20716953
NOTE ZM_BFb0115B11

HITS Os09g35960[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL GTPase activator protein of Rab-like small GTPases-like protein, putative, expressed (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12009.m06547.) ;
LOCN Exon
COOR C/20716275-20717508,20717770-20717823,20718352-20718401,20718577-20718712,20720323-20720588

CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr10
EVAL 1e-29
COOR W/19697762-19697828,19697943-19697959,19697954-19698015,19698136-19698184
NOTE ZM_BFb0115B11

HITS Os10g37410[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL GTPase activator protein of Rab-like small GTPases-like protein, putative, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12010.m06530 (update, updateIDs: 50330, (gene: 12010.t03002, model: 12010.m06530)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12010.m06530.) ;
LOCN Exon
COOR W/19695424-19695578,19695684-19695819,19696074-19696123,19696745-19696798,19697032-19698397

CLON BT061142[GenBank] 
TYPE Maize cDNA
CHRO chr11
EVAL 1e-69
COOR W/21766523-21766551,21766755-21766814,21766903-21766953,21767205-21767238,21767305-21767338,21767508-21767542,21767673-21767702,21767788-21767800,21767883-21767924,21768052-21768073,21768135-21768163,21768229-21768260,21768811-21768835,21768884-21768909,21769547-21769577
NOTE ZM_BFb0115B11

HITS Os11g37690[Seq] [RiceGE] [RiceGE Text] [Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] 
TYPE Gene
TITL TBC domain containing protein, expressed PASA (rice_osa1r5_gmapsim4_05232006) AUTOUPDATE: Updated structure of 12011.m07614 (update, updateIDs: 55584, (gene: 12011.t03309, model: 12011.m07614)); (PASA (rice_release4_08302005) AUTOUPDATE: Updated structure of 12011.m07614.) ;
LOCN Exon
COOR C/21766388-21766408,21766525-21766608,21766754-21767017,21767207-21767304,21767403-21767508,21767584-21767672,21767760-21767882,21767989-21768248,21768781-21768884,21769455-21769550,21769773-21769871



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