RiceGE: Genome Express Database ( Oct. 6, 2010 )


CLON P0672D08[GenBank] 
TYPE Rice BACs
CHRO chr01
EVAL 0
COOR W/2199-175927
NOTE AP003727 RGP

HITS Os01g01010[Seq] [RiceGE6]  [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1] 
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01010.2 TBC domain containing protein, expressed LOCN Exon COOR W/2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,7232-7320,7408-7608,8210-8311,9104-9187,9232-9244,9504-9562 HITS Os01g01010[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01010.1 TBC domain containing protein, expressed LOCN Exon COOR W/2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,7232-7320,7408-7608,8210-8617,9104-9187,9274-9297 HITS Os01g01019[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01019.1 expressed protein LOCN Exon COOR W/10798-11060,11152-11317 HITS Os01g01030[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01030.1 monocopper oxidase, putative, expressed LOCN Exon COOR W/11774-12813,12906-13271,13359-13437,13969-14171,14266-14359 HITS Os01g01040[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01040.1 expressed protein LOCN Exon COOR W/15599-15976,16383-16474,16558-17258,17501-17571,17968-18057,18142-18321,18531-18593 HITS Os01g01040[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01040.2 expressed protein LOCN Exon COOR W/15599-15976,16383-16474,16558-17258,17501-17571,17968-18057,18142-18321,18531-18593 HITS Os01g01040[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01040.3 expressed protein LOCN Exon COOR W/15599-15976,16383-16474,16558-17258,17501-17571,17968-18057,18142-18321,18531-18593 HITS Os01g01040[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01040.4 expressed protein LOCN Exon COOR W/15599-15976,16383-16474,16558-17272 HITS Os01g01050[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01050.1 R3H domain containing protein, expressed LOCN Exon COOR W/22232-22281,22572-22847,22962-23033,23492-23577,24445-24519,24883-25391 HITS Os01g01050[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01050.2 R3H domain containing protein, expressed LOCN Exon COOR W/22258-22281,22615-22847,22962-23033,23492-23577,24445-24519,24883-25391 HITS Os01g01060[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01060.1 40S ribosomal protein S5, putative, expressed LOCN Exon COOR W/26221-26292,26370-26641,27090-27293,27365-27419 HITS Os01g01070[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01070.2 expressed protein LOCN Exon COOR W/28940-28976,29146-29228,29735-29806,29885-29963,30258-30325,30505-30606,31377-31466,31542-31616,31712-31744,31828-31908,32277-32330,32400-32471,32543-32617,32975-33124 HITS Os01g01070[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01070.3 expressed protein LOCN Exon COOR W/28940-28976,29146-29228,29735-29806,29885-29963,30258-30325,30505-30606,31377-31466,31542-31616,31712-31744,31828-31908,32277-32330,32400-32471,32543-32647 HITS Os01g01070[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01070.1 expressed protein LOCN Exon COOR W/28940-28976,29146-29228,29735-29806,29885-29963,30258-30331,30505-30606,31377-31466,31542-31616,31712-31744,31828-31908,32277-32330,32400-32471,32543-32617,32975-33124 HITS Os01g01080[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01080.1 decarboxylase, putative, expressed LOCN Exon COOR W/34743-34939,35027-35072,35517-35668,35818-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS Os01g01080[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01080.2 decarboxylase, putative, expressed LOCN Exon COOR W/35876-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS Os01g01080[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01080.3 decarboxylase, putative, expressed LOCN Exon COOR W/35876-35877,36594-36818,36892-37033,37276-37326,37434-37525,38319-38445,38553-38568,38939-39046,39135-39189,39456-39602,39703-39781,39885-40007 HITS Os01g01090[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01090.1 retrotransposon protein, putative, unclassified LOCN Exon COOR W/43595-44197,44276-44479,44566-44855,44920-45296,45374-45561,45636-45825,45897-46001,46075-46526 HITS Os01g01100[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01100.1 retrotransposon protein, putative, Ty3-gypsy subclass LOCN Exon COOR C/46856-47945,48864-49932,50023-51322,51389-51662,52129-52412 HITS Os01g01110[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01110.1 conserved hypothetical protein LOCN Exon COOR W/54914-54918,56084-56972 HITS Os01g01115[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01115.1 pentatricopeptide, putative LOCN Exon COOR W/57658-60090 HITS Os01g01120[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01120.1 enolase-phosphatase E1, putative, expressed LOCN Exon COOR W/61104-61295,61385-61905,61996-62114,62248-62345 HITS Os01g01130[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01130.1 snurportin-1, putative, expressed LOCN Exon COOR C/62670-62783,62877-63020,63339-63431,63665-63779,63902-64152,64248-64431,64628-64950 HITS Os01g01140[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01140.1 hypothetical protein LOCN Exon COOR W/68675-68962,69027-69131 HITS Os01g01150[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01150.1 RNA recognition motif, putative, expressed LOCN Exon COOR W/71903-72935,73468-73981,74619-76008 HITS Os01g01150[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01150.2 RNA recognition motif, putative, expressed LOCN Exon COOR W/71903-72935,73468-73981,74619-76008 HITS Os01g01150[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01150.3 RNA recognition motif, putative, expressed LOCN Exon COOR W/71903-72935,73468-73981,74619-76008 HITS Os01g01160[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01160.1 heat shock protein DnaJ, putative, expressed LOCN Exon COOR W/81507-81932,82718-82864 HITS Os01g01170[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01170.1 expressed protein LOCN Exon COOR W/84379-84600,84737-84830,84935-85086,85212-85299,85399-86681,87291-87398,87500-87583 HITS Os01g01180[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01180.1 expressed protein LOCN Exon COOR C/87986-88204 HITS Os01g01190[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01190.1 phosphoesterase family protein, putative, expressed LOCN Exon COOR C/88825-90468 HITS Os01g01200[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01200.1 retrotransposon protein, putative, unclassified LOCN Exon COOR W/94499-95105,95297-95421,95489-95680,95751-95809,95884-96648,96728-96881,97088-97558 HITS Os01g01210[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01210.1 retrotransposon protein, putative, unclassified LOCN Exon COOR C/98171-98793,99666-99681 HITS Os01g01230[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01230.1 transposon protein, putative, unclassified LOCN Exon COOR W/104872-105534 HITS Os01g01240[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01240.1 retrotransposon protein, putative, Ty3-gypsy subclass LOCN Exon COOR W/107618-107685,109216-109261,109409-113983 HITS Os01g01250[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01250.1 transposon protein, putative, unclassified LOCN Exon COOR W/117081-117697,117790-119671 HITS Os01g01260[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01260.1 transposon protein, putative, unclassified LOCN Exon COOR C/120302-124030,124103-126457 HITS Os01g01270[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01270.1 retrotransposon protein, putative, unclassified LOCN Exon COOR C/127897-128185,128490-128800,128870-129186,129424-130459,130574-130955,131055-132559 HITS Os01g01280[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01280.1 expressed protein LOCN Exon COOR W/133311-133615,133698-133824,133912-134253 HITS Os01g01290[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01290.1 histone-like transcription factor and archaeal histone, putative, expressed LOCN Exon COOR W/139150-140415 HITS Os01g01295[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01295.1 expressed protein LOCN Exon COOR W/141084-141631,142191-142431,142563-142680,142817-142908 HITS Os01g01302[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01302.1 shikimate kinase, putative, expressed LOCN Exon COOR W/144645-144786,144905-144951,145028-145082,145179-145339,145450-145532,145611-145719,146106-146184,146311-146375,146507-146575 HITS Os01g01307[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01307.2 translocon-associated protein beta domain containing protein, expressed LOCN Exon COOR W/147147-147239,148520-148548,148634-148742,148856-148927,149056-149061,149152-149271 HITS Os01g01307[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01307.1 translocon-associated protein beta domain containing protein, expressed LOCN Exon COOR W/147147-147313,148450-148548,148634-148742,148856-148927,149056-149061,149152-149271 HITS Os01g01312[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01312.1 retrotransposon protein, putative, Ty1-copia subclass, expressed LOCN Exon COOR W/150823-150915,151048-151539,151629-152025,152178-153646,154010-154450,154543-155214 HITS Os01g01320[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01320.1 retrotransposon protein, putative, Ty1-copia subclass LOCN Exon COOR C/156728-157039,157218-157736,157770-158782,158978-159941 HITS Os01g01330[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01330.1 retrotransposon protein, putative, Ty1-copia subclass, expressed LOCN Exon COOR C/160365-160768,162289-162625 HITS Os01g01340[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01340.1 light-induced protein 1-like, putative, expressed LOCN Exon COOR C/168599-168656,168751-168909,169091-169260 HITS Os01g01340[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01340.2 light-induced protein 1-like, putative, expressed LOCN Exon COOR C/168747-168909,169091-169260 HITS Os01g01350[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01350.2 SNF7 domain containing protein, putative, expressed LOCN Exon COOR C/170045-170095,170406-170554,170764-170875,171398-171469,171578-171652 HITS Os01g01350[Seq] [RiceGE6] [RiceGE6 Text] [RiceGE v5] [About MSU Rice Annotation v 6.1]
[Rice GO] [Gramene] [SNP] [Microarray: RMOS|GEO] [TIGR Evidence] TYPE Gene TITL Os01g01350.1 SNF7 domain containing protein, putative, expressed LOCN Exon COOR C/170045-170095,170406-170554,170764-170875,171398-171469,171578-171671,171770-171921,172004-172072

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